Mercurial > hg > octave-lyh
annotate scripts/io/textscan.m @ 14383:07c55bceca23 stable
Fix guarded_eval() subfunction in fminunc (bug #35534).
* fminunc.m: Fix guarded_eval() subfunction in fminunc (bug #35534).
author | Olaf Till <olaf.till@uni-jena.de> |
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date | Wed, 15 Feb 2012 14:44:37 +0100 |
parents | 72c96de7a403 |
children | a022c04f68cc 878623ca15e1 |
rev | line source |
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1 ## Copyright (C) 2010-2012 Ben Abbott <bpabbott@mac.com> |
11141 | 2 ## |
3 ## This file is part of Octave. | |
4 ## | |
5 ## Octave is free software; you can redistribute it and/or modify it | |
6 ## under the terms of the GNU General Public License as published by | |
7 ## the Free Software Foundation; either version 3 of the License, or (at | |
8 ## your option) any later version. | |
9 ## | |
10 ## Octave is distributed in the hope that it will be useful, but | |
11 ## WITHOUT ANY WARRANTY; without even the implied warranty of | |
12 ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
13 ## General Public License for more details. | |
14 ## | |
15 ## You should have received a copy of the GNU General Public License | |
16 ## along with Octave; see the file COPYING. If not, see | |
17 ## <http://www.gnu.org/licenses/>. | |
18 | |
19 ## -*- texinfo -*- | |
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20 ## @deftypefn {Function File} {@var{C} =} textscan (@var{fid}, @var{format}) |
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21 ## @deftypefnx {Function File} {@var{C} =} textscan (@var{fid}, @var{format}, @var{n}) |
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22 ## @deftypefnx {Function File} {@var{C} =} textscan (@var{fid}, @var{format}, @var{param}, @var{value}, @dots{}) |
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23 ## @deftypefnx {Function File} {@var{C} =} textscan (@var{fid}, @var{format}, @var{n}, @var{param}, @var{value}, @dots{}) |
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24 ## @deftypefnx {Function File} {@var{C} =} textscan (@var{str}, @dots{}) |
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25 ## @deftypefnx {Function File} {[@var{C}, @var{position}] =} textscan (@var{fid}, @dots{}) |
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26 ## Read data from a text file or string. |
11141 | 27 ## |
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28 ## The file associated with @var{fid} is read and parsed according to |
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29 ## @var{format}. The function behaves like @code{strread} except it works by |
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30 ## parsing a file instead of a string. See the documentation of |
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31 ## @code{strread} for details. |
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32 ## |
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33 ## In addition to the options supported by |
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34 ## @code{strread}, this function supports a few more: |
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35 ## |
11141 | 36 ## @itemize |
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37 ## @item "collectoutput": |
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38 ## A value of 1 or true instructs textscan to concatenate consecutive columns |
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39 ## of the same class in the output cell array. A value of 0 or false (default) |
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40 ## leaves output in distinct columns. |
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41 ## |
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42 ## @item "endofline": |
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43 ## Specify "\r", "\n" or "\r\n" (for CR, LF, or CRLF). If no value is given, |
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44 ## it will be inferred from the file. If set to "" (empty string) EOLs are |
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45 ## ignored as delimiters and added to whitespace. |
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46 ## |
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47 ## @item "headerlines": |
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48 ## The first @var{value} number of lines of @var{fid} are skipped. |
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49 ## |
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50 ## @item "returnonerror": |
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51 ## If set to numerical 1 or true (default), return normally when read errors |
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52 ## have been encountered. If set to 0 or false, return an error and no data. |
11141 | 53 ## @end itemize |
54 ## | |
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55 ## The optional input @var{n} specifes the number of times to use |
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56 ## @var{format} when parsing, i.e., the format repeat count. |
11141 | 57 ## |
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58 ## The output @var{C} is a cell array whose length is given by the number |
11141 | 59 ## of format specifiers. |
60 ## | |
61 ## The second output, @var{position}, provides the position, in characters, | |
62 ## from the beginning of the file. | |
63 ## | |
64 ## @seealso{dlmread, fscanf, load, strread, textread} | |
65 ## @end deftypefn | |
66 | |
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67 function [C, position] = textscan (fid, format = "%f", varargin) |
11141 | 68 |
69 ## Check input | |
70 if (nargin < 1) | |
71 print_usage (); | |
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72 endif |
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73 |
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74 if (isempty (format)) |
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75 format = "%f"; |
11141 | 76 endif |
77 | |
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78 if (! (isa (fid, "double") && fid > 0) && ! ischar (fid)) |
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79 error ("textscan: first argument must be a file id or character string"); |
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80 endif |
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81 |
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82 if (! ischar (format)) |
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83 error ("textscan: FORMAT must be a string"); |
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84 endif |
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85 |
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86 args = varargin; |
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87 if (nargin > 2 && isnumeric (args{1})) |
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88 nlines = args{1}; |
11141 | 89 else |
90 nlines = Inf; | |
91 endif | |
92 | |
93 if (! any (strcmpi (args, "emptyvalue"))) | |
94 ## Matlab returns NaNs for missing values | |
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95 args(end+1:end+2) = {'emptyvalue', NaN}; |
11141 | 96 endif |
97 | |
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98 ## Check default parameter values that differ for strread & textread |
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99 |
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100 ipos = find (strcmpi (args, "whitespace")); |
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101 if (isempty (ipos)) |
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102 ## Matlab default whitespace = " \b\t" |
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103 args(end+1:end+2) = {'whitespace', " \b\t"}; |
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104 whitespace = " \b\t"; |
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105 else |
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106 ## Check if there's at least one string format specifier |
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107 fmt = strrep (format, "%", " %"); |
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108 fmt = regexp (fmt, '[^ ]+', 'match'); |
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109 fmt = strtrim (fmt(strmatch ("%", fmt))) |
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110 has_str_fmt = all (cellfun ("isempty", strfind (strtrim (fmt(strmatch ("%", fmt))), 's'))); |
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111 ## If there is a format, AND whitespace value = empty, |
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112 ## don't add a space (char(32)) to whitespace |
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113 if (! (isempty (args{ipos+1}) && has_str_fmt)) |
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114 args{ipos+1} = unique ([" ", whitespace]); |
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115 endif |
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116 endif |
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117 |
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118 if (! any (strcmpi (args, "delimiter"))) |
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119 ## Matlab says default delimiter = whitespace. |
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120 ## strread() will pick this up further |
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121 args(end+1:end+2) = {'delimiter', ""}; |
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122 endif |
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123 |
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124 collop = false; |
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125 ipos = find (strcmpi (args, "collectoutput")); |
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126 if (! isempty (ipos)) |
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127 ## Search & concatenate consecutive columns of same class requested |
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128 if (isscalar (args{ipos+1}) |
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129 && (islogical (args{ipos+1}) || isnumeric (args{ipos+1}))) |
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130 collop = args{ipos+1}; |
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131 else |
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132 warning ("textscan: illegal value for CollectOutput parameter - ignored"); |
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133 endif |
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134 ## Remove argument before call to strread() below |
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135 args(ipos:ipos+1) = []; |
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136 endif |
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137 |
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138 if (any (strcmpi (args, "returnonerror"))) |
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139 ## Because of the way strread() reads data (columnwise) this parameter |
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140 ## can't be neatly implemented. strread() will pick it up anyway |
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141 warning ('textscan: ReturnOnError is not fully implemented'); |
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142 else |
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143 ## Set default value (=true) |
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144 args(end+1:end+2) = {"returnonerror", 1}; |
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145 endif |
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146 |
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147 if (ischar (fid)) |
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148 ## Read from a text string |
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149 if (nargout == 2) |
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150 error ("textscan: cannot provide position information for character input"); |
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151 endif |
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152 str = fid; |
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153 else |
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154 ## Skip header lines if requested |
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155 headerlines = find (strcmpi (args, "headerlines"), 1); |
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156 ## Beware of zero valued headerline, fskipl would skip to EOF |
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157 if (! isempty (headerlines) && (args{headerlines + 1} > 0)) |
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158 fskipl (fid, varargin{headerlines + 1}); |
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159 args(headerlines:headerlines+1) = []; |
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160 endif |
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161 if (isfinite (nlines) && (nlines >= 0)) |
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162 str = tmp_str = ""; |
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163 n = 0; |
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164 ## FIXME: Can this be done without slow loop? |
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165 while (ischar (tmp_str) && n++ < nlines) |
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166 tmp_str = fgets (fid); |
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167 if (ischar (tmp_str)) |
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168 str = strcat (str, tmp_str); |
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169 endif |
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170 endwhile |
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171 else |
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172 str = fread (fid, "char=>char").'; |
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173 endif |
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174 endif |
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175 |
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176 ## Check for empty result |
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177 if (isempty (str)) |
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178 warning ("textscan: no data read"); |
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179 C = []; |
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180 return; |
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181 endif |
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182 |
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183 ## Check value of 'endofline'. String or file doesn't seem to matter |
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184 endofline = find (strcmpi (args, "endofline"), 1); |
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185 if (! isempty (endofline)) |
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186 if (ischar (args{endofline + 1})) |
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187 eol_char = args{endofline + 1}; |
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188 if (isempty (strmatch (eol_char, {"", "\n", "\r", "\r\n"}, 'exact'))) |
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189 error ("textscan: illegal EndOfLine character value specified"); |
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190 endif |
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191 else |
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192 error ("textscan: character value required for EndOfLine"); |
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193 endif |
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194 else |
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195 ## Determine EOL from file. Search for EOL candidates in first 3000 chars |
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196 eol_srch_len = min (length (str), 3000); |
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197 ## First try DOS (CRLF) |
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198 if (! isempty (findstr ("\r\n", str(1 : eol_srch_len)))) |
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199 eol_char = "\r\n"; |
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200 ## Perhaps old Macintosh? (CR) |
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201 elseif (! isempty (findstr ("\r", str(1 : eol_srch_len)))) |
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202 eol_char = "\r"; |
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203 ## Otherwise, use plain UNIX (LF) |
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204 else |
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205 eol_char = "\n"; |
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206 endif |
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207 ## Set up the default endofline param value |
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208 args(end+1:end+2) = {'endofline', eol_char}; |
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209 endif |
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210 |
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211 ## Determine the number of data fields |
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212 num_fields = numel (strfind (format, "%")) - numel (strfind (format, "%*")); |
11141 | 213 |
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214 ## Strip trailing EOL to avoid returning stray missing values (f. strread) |
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215 if (strcmp (str(end-length (eol_char) + 1 : end), eol_char)); |
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216 str(end-length (eol_char) + 1 : end) = ""; |
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217 endif |
11141 | 218 |
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219 ## Call strread to make it do the real work |
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220 C = cell (1, num_fields); |
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221 [C{:}] = strread (str, format, args{:}); |
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222 |
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223 ## If requested, collect output columns of same class |
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224 if (collop) |
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225 C = colloutp (C); |
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226 endif |
11141 | 227 |
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228 if (nargout == 2) |
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229 position = ftell (fid); |
11141 | 230 endif |
231 | |
232 endfunction | |
233 | |
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234 |
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235 ## Collect consecutive columns of same class into one cell column |
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236 function C = colloutp (C) |
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237 |
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238 ## Start at rightmost column and work backwards to avoid ptr mixup |
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239 ii = numel (C); |
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240 while ii > 1 |
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241 clss1 = class (C{ii}); |
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242 jj = ii; |
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243 while (jj > 1 && strcmp (clss1, class (C{jj - 1}))) |
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244 ## Column to the left is still same class; check next column to the left |
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245 --jj; |
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246 endwhile |
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247 if (jj < ii) |
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248 ## Concatenate columns into current column |
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249 C{jj} = [C{jj : ii}]; |
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250 ## Wipe concatenated columns to the right, resume search to the left |
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251 C(jj+1 : ii) = []; |
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252 ii = jj - 1; |
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253 else |
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254 ## No similar class in column to the left, search from there |
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255 --ii; |
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256 endif |
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257 endwhile |
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258 |
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259 endfunction |
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260 |
11141 | 261 %!test |
262 %! str = "1, 2, 3, 4\n 5, , , 8\n 9, 10, 11, 12"; | |
263 %! fmtstr = "%f %d %f %s"; | |
264 %! c = textscan (str, fmtstr, 2, "delimiter", ",", "emptyvalue", -Inf); | |
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265 %! assert (isequal (c{1}, [1;5])); |
11141 | 266 %! assert (length (c{1}), 2); |
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267 %! assert (iscellstr (c{4})); |
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268 %! assert (isequal (c{3}, [3; -Inf])); |
11141 | 269 |
270 %!test | |
271 %! b = [10:10:100]; | |
272 %! b = [b; 8*b/5]; | |
273 %! str = sprintf ("%g miles/hr = %g kilometers/hr\n", b); | |
274 %! fmt = "%f miles/hr = %f kilometers/hr"; | |
275 %! c = textscan (str, fmt); | |
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276 %! assert (b(1,:)', c{1}, 1e-5); |
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277 %! assert (b(2,:)', c{2}, 1e-5); |
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278 |
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279 #%!test |
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280 #%! str = "13, 72, NA, str1, 25\r\n// Middle line\r\n36, na, 05, str3, 6"; |
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281 #%! a = textscan(str, '%d %n %f %s %n', 'delimiter', ',','treatAsEmpty', {'NA', 'na'},'commentStyle', '//'); |
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282 #%! assert (a{1}, int32([13; 36])); |
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283 #%! assert (a{2}, [72; NaN]); |
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284 #%! assert (a{3}, [NaN; 5]); |
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285 #%! assert (a{4}, {"str1"; "str3"}); |
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286 #%! assert (a{5}, [25; 6]); |
11141 | 287 |
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288 %!test |
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289 %! str = "Km:10 = hhhBjjj miles16hour\r\n"; |
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290 %! str = [str "Km:15 = hhhJjjj miles241hour\r\n"]; |
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291 %! str = [str "Km:2 = hhhRjjj miles3hour\r\n"]; |
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292 %! str = [str "Km:25 = hhhZ\r\n"]; |
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293 %! fmt = "Km:%d = hhh%1sjjj miles%dhour"; |
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294 %! a = textscan (str, fmt, 'delimiter', ' '); |
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295 %! assert (a{1}', int32([10 15 2 25])); |
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296 %! assert (a{2}', {'B' 'J' 'R' 'Z'}); |
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297 %! assert (a{3}', int32([16 241 3 0])); |
11141 | 298 |
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299 %% Test with default endofline parameter |
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300 %!test |
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301 %! c = textscan ("L1\nL2", "%s"); |
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302 %! assert (c{:}, {"L1"; "L2"}); |
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303 |
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304 %% Test with endofline parameter set to '' (empty) - newline should be in word |
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305 %!test |
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306 %! c = textscan ("L1\nL2", "%s", 'endofline', ''); |
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307 %! assert (int8(c{:}{:}), int8([ 76, 49, 10, 76, 50 ])); |
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308 |
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309 %!test |
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310 %! # No delimiters at all besides EOL. Skip fields, even empty fields |
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311 %! str = "Text1Text2Text\nTextText4Text\nText57Text"; |
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312 %! c = textscan (str, "Text%*dText%dText"); |
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313 %! assert (c{1}, int32 ([2; 4; 0])); |
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314 |
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315 %!test |
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316 %% CollectOutput test |
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317 %! b = [10:10:100]; |
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318 %! b = [b; 8*b/5; 8*b*1000/5]; |
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319 %! str = sprintf ("%g miles/hr = %g (%g) kilometers (meters)/hr\n", b); |
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320 %! fmt = "%f miles%s %s %f (%f) kilometers %*s"; |
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321 %! c = textscan (str, fmt, 'collectoutput', 1); |
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322 %! assert (size(c{3}), [10, 2]); |
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323 %! assert (size(c{2}), [10, 2]); |
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324 |
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325 %% Test input validation |
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326 %!error textscan () |
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327 %!error textscan (single (4)) |
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328 %!error textscan ({4}) |
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329 %!error <must be a string> textscan ("Hello World", 2) |
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330 %!error <cannot provide position information> [C, pos] = textscan ("Hello World") |
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331 %!error <character value required> textscan ("Hello World", '%s', 'EndOfLine', 3) |
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332 |