view scripts/linear-algebra/krylov.m @ 14964:5d3a684236b0

maint: Use Octave coding conventions for cuddling parentheses in scripts directory * lin2mu.m, loadaudio.m, wavread.m, accumarray.m, bicubic.m, celldisp.m, colon.m, cplxpair.m, dblquad.m, divergence.m, genvarname.m, gradient.m, int2str.m, interp1.m, interp1q.m, interp2.m, interpn.m, loadobj.m, nthargout.m, __isequal__.m, __splinen__.m, quadgk.m, quadl.m, quadv.m, rat.m, rot90.m, rotdim.m, saveobj.m, subsindex.m, triplequad.m, delaunay3.m, griddata.m, inpolygon.m, tsearchn.m, voronoi.m, get_first_help_sentence.m, which.m, gray2ind.m, pink.m, dlmwrite.m, strread.m, textread.m, textscan.m, housh.m, ishermitian.m, issymmetric.m, krylov.m, logm.m, null.m, rref.m, compare_versions.m, copyfile.m, dump_prefs.m, edit.m, fileparts.m, getappdata.m, isappdata.m, movefile.m, orderfields.m, parseparams.m, __xzip__.m, rmappdata.m, setappdata.m, swapbytes.m, unpack.m, ver.m, fminbnd.m, fminunc.m, fsolve.m, glpk.m, lsqnonneg.m, qp.m, sqp.m, configure_make.m, copy_files.m, describe.m, get_description.m, get_forge_pkg.m, install.m, installed_packages.m, is_architecture_dependent.m, load_package_dirs.m, print_package_description.m, rebuild.m, repackage.m, save_order.m, shell.m, allchild.m, ancestor.m, area.m, axes.m, axis.m, clabel.m, close.m, colorbar.m, comet.m, comet3.m, contour.m, cylinder.m, ezmesh.m, ezsurf.m, findobj.m, fplot.m, hist.m, isocolors.m, isonormals.m, isosurface.m, isprop.m, legend.m, mesh.m, meshz.m, pareto.m, pcolor.m, peaks.m, plot3.m, plotmatrix.m, plotyy.m, polar.m, print.m, __add_datasource__.m, __add_default_menu__.m, __axes_limits__.m, __bar__.m, __clabel__.m, __contour__.m, __errcomm__.m, __errplot__.m, __ezplot__.m, __file_filter__.m, __fltk_print__.m, __ghostscript__.m, __gnuplot_print__.m, __go_draw_axes__.m, __go_draw_figure__.m, __interp_cube__.m, __marching_cube__.m, __patch__.m, __pie__.m, __plt__.m, __print_parse_opts__.m, __quiver__.m, __scatter__.m, __stem__.m, __tight_eps_bbox__.m, __uigetdir_fltk__.m, __uigetfile_fltk__.m, __uiputfile_fltk__.m, quiver.m, quiver3.m, rectangle.m, refreshdata.m, ribbon.m, scatter.m, semilogy.m, shading.m, slice.m, subplot.m, surface.m, surfl.m, surfnorm.m, text.m, uigetfile.m, uiputfile.m, whitebg.m, deconv.m, mkpp.m, pchip.m, polyaffine.m, polyder.m, polygcd.m, polyout.m, polyval.m, ppint.m, ppjumps.m, ppval.m, residue.m, roots.m, spline.m, splinefit.m, addpref.m, getpref.m, setpref.m, ismember.m, setxor.m, arch_fit.m, arch_rnd.m, arch_test.m, autoreg_matrix.m, diffpara.m, fftconv.m, filter2.m, hanning.m, hurst.m, periodogram.m, triangle_sw.m, sinc.m, spectral_xdf.m, spencer.m, stft.m, synthesis.m, unwrap.m, yulewalker.m, bicgstab.m, gmres.m, pcg.m, pcr.m, __sprand_impl__.m, speye.m, spfun.m, sprandn.m, spstats.m, svds.m, treelayout.m, treeplot.m, bessel.m, factor.m, legendre.m, perms.m, primes.m, magic.m, toeplitz.m, corr.m, cov.m, mean.m, median.m, mode.m, qqplot.m, quantile.m, ranks.m, zscore.m, logistic_regression_likelihood.m, bartlett_test.m, chisquare_test_homogeneity.m, chisquare_test_independence.m, kolmogorov_smirnov_test.m, run_test.m, u_test.m, wilcoxon_test.m, z_test.m, z_test_2.m, bin2dec.m, dec2base.m, mat2str.m, strcat.m, strchr.m, strjust.m, strtok.m, substr.m, untabify.m, assert.m, demo.m, example.m, fail.m, speed.m, test.m, now.m: Use Octave coding conventions for cuddling parentheses in scripts directory.
author Rik <octave@nomad.inbox5.com>
date Tue, 17 Jul 2012 07:08:39 -0700
parents 72c96de7a403
children
line wrap: on
line source

## Copyright (C) 1993-2012 Auburn University.  All rights reserved.
##
## This file is part of Octave.
##
## Octave is free software; you can redistribute it and/or modify it
## under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or (at
## your option) any later version.
##
## Octave is distributed in the hope that it will be useful, but
## WITHOUT ANY WARRANTY; without even the implied warranty of
## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
## General Public License for more details.
##
## You should have received a copy of the GNU General Public License
## along with Octave; see the file COPYING.  If not, see
## <http://www.gnu.org/licenses/>.

## -*- texinfo -*-
## @deftypefn {Function File} {[@var{u}, @var{h}, @var{nu}] =} krylov (@var{A}, @var{V}, @var{k}, @var{eps1}, @var{pflg})
## Construct an orthogonal basis @var{u} of block Krylov subspace
##
## @example
## [v a*v a^2*v @dots{} a^(k+1)*v]
## @end example
##
## @noindent
## Using Householder reflections to guard against loss of orthogonality.
##
## If @var{V} is a vector, then @var{h} contains the Hessenberg matrix
## such that @nospell{@xcode{a*u == u*h+rk*ek'}}, in which @code{rk =
## a*u(:,k)-u*h(:,k)}, and @nospell{@xcode{ek'}} is the vector
## @code{[0, 0, @dots{}, 1]} of length @code{k}.  Otherwise, @var{h} is
## meaningless.
##
## If @var{V} is a vector and @var{k} is greater than
## @code{length (A) - 1}, then @var{h} contains the Hessenberg matrix such
## that @code{a*u == u*h}.
##
## The value of @var{nu} is the dimension of the span of the Krylov
## subspace (based on @var{eps1}).
##
## If @var{b} is a vector and @var{k} is greater than @var{m-1}, then
## @var{h} contains the Hessenberg decomposition of @var{A}.
##
## The optional parameter @var{eps1} is the threshold for zero.  The
## default value is 1e-12.
##
## If the optional parameter @var{pflg} is nonzero, row pivoting is used
## to improve numerical behavior.  The default value is 0.
##
## Reference: A. Hodel, P. Misra, @cite{Partial Pivoting in the Computation of
## Krylov Subspaces of Large Sparse Systems}, Proceedings of the 42nd IEEE
## Conference on Decision and Control, December 2003.
## @end deftypefn

## Author: A. Scottedward Hodel <a.s.hodel@eng.auburn.edu>

function [Uret, H, nu] = krylov (A, V, k, eps1, pflg);

  if (isa (A, "single") || isa (V, "single"))
    defeps = 1e-6;
  else
    defeps = 1e-12;
  endif

  if (nargin < 3 || nargin > 5)
    print_usage ();
  elseif (nargin < 5)
    ## Default permutation flag.
    pflg = 0;
  endif

  if (nargin < 4)
    ## Default tolerance parameter.
    eps1 = defeps;
  endif

  if (isempty (eps1))
    eps1 = defeps;
  endif

  if (! issquare (A) || isempty (A))
    error ("krylov: A(%d x %d) must be a non-empty square matrix", rows (A), columns (A));
  endif
  na = rows (A);

  [m, kb] = size (V);
  if (m != na)
    error ("krylov: A(%d x %d), V(%d x %d): argument dimensions do not match",
          na, na, m, kb);
  endif

  if (! isscalar (k))
    error ("krylov: K must be a scalar integer");
  endif

  Vnrm = norm (V, Inf);

  ## check for trivial solution.
  if (Vnrm == 0)
    Uret = [];
    H = [];
    nu = 0;
    return;
  endif

  ## Identify trivial null space.
  abm = max (abs ([A, V]'));
  zidx = find (abm == 0);

  ## Set up vector of pivot points.
  pivot_vec = 1:na;

  iter = 0;
  alpha = [];
  nh = 0;
  while (length (alpha) < na) && (columns (V) > 0) && (iter < k)
    iter++;

    ## Get orthogonal basis of V.
    jj = 1;
    while (jj <= columns (V) && length (alpha) < na)
      ## Index of next Householder reflection.
      nu = length (alpha)+1;

      short_pv = pivot_vec(nu:na);
      q = V(:,jj);
      short_q = q(short_pv);

      if (norm (short_q) < eps1)
        ## Insignificant column; delete.
        nv = columns (V);
        if (jj != nv)
          [V(:,jj), V(:,nv)] = swap (V(:,jj), V(:,nv));
          ## FIXME -- H columns should be swapped too.  Not done
          ## since Block Hessenberg structure is lost anyway.
        endif
        V = V(:,1:(nv-1));
        ## One less reflection.
        nu--;
      else
        ## New householder reflection.
        if (pflg)
          ## Locate max magnitude element in short_q.
          asq = abs (short_q);
          maxv = max (asq);
          maxidx = find (asq == maxv, 1);
          pivot_idx = short_pv(maxidx);

          ## See if need to change the pivot list.
          if (pivot_idx != pivot_vec(nu))
            swapidx = maxidx + (nu-1);
            [pivot_vec(nu), pivot_vec(swapidx)] = ...
                swap (pivot_vec(nu), pivot_vec(swapidx));
          endif
        endif

        ## Isolate portion of vector for reflection.
        idx = pivot_vec(nu:na);
        jdx = pivot_vec(1:nu);

        [hv, av, z] = housh (q(idx), 1, 0);
        alpha(nu) = av;
        U(idx,nu) = hv;

        ## Reduce V per the reflection.
        V(idx,:) = V(idx,:) - av*hv*(hv' * V(idx,:));
        if(iter > 1)
          ## FIXME -- not done correctly for block case.
          H(nu,nu-1) = V(pivot_vec(nu),jj);
        endif

        ## Advance to next column of V.
        jj++;
      endif
    endwhile

    ## Check for oversize V (due to full rank).
    if ((columns (V) > na) && (length (alpha) == na))
      ## Trim to size.
      V = V(:,1:na);
    elseif (columns(V) > na)
      krylov_V = V;
      krylov_na = na;
      krylov_length_alpha = length (alpha);
      error ("krylov: this case should never happen; submit a bug report");
    endif

    if (columns (V) > 0)
      ## Construct next Q and multiply.
      Q = zeros (size (V));
      for kk = 1:columns (Q)
        Q(pivot_vec(nu-columns(Q)+kk),kk) = 1;
      endfor

      ## Apply Householder reflections.
      for ii = nu:-1:1
        idx = pivot_vec(ii:na);
        hv = U(idx,ii);
        av = alpha(ii);
        Q(idx,:) = Q(idx,:) - av*hv*(hv'*Q(idx,:));
      endfor
    endif

    ## Multiply to get new vector.
    V = A*Q;
    ## Project off of previous vectors.
    nu = length (alpha);
    for i = 1:nu
      hv = U(:,i);
      av = alpha(i);
      V = V - av*hv*(hv'*V);
      H(i,nu-columns(V)+(1:columns(V))) = V(pivot_vec(i),:);
    endfor

  endwhile

  ## Back out complete U matrix.
  ## back out U matrix.
  j1 = columns (U);
  for i = j1:-1:1;
    idx = pivot_vec(i:na);
    hv = U(idx,i);
    av = alpha(i);
    U(:,i) = zeros (na, 1);
    U(idx(1),i) = 1;
    U(idx,i:j1) = U(idx,i:j1)-av*hv*(hv'*U(idx,i:j1));
  endfor

  nu = length (alpha);
  Uret = U;
  if (max (max (abs (Uret(zidx,:)))) > 0)
    warning ("krylov: trivial null space corrupted; set pflg = 1 or eps1 > %e",
             eps1);
  endif

endfunction


function [a1, b1] = swap (a, b)

  a1 = b;
  b1 = a;

endfunction