Mercurial > hg > octave-lyh
annotate src/DLD-FUNCTIONS/convhulln.cc @ 14043:f913363318e0 stable
handle new names and locations of qhull include files (bug #33712)
* src/DLD-FUNCTIONS/oct-qhull.h: New file. Handle details of which
Qhull header files to include here.
* src/DLD-FUNCTIONS/config-module.awk: Include oct-qhull.h in list of
EXTRA_DIST files.
* configure.ac: Check for qhull/libqhull.h, libqhull.h, qhull/qhull.h,
and qhull.h instead of qhull/libqhull_a.h.
* __delaunayn__.cc, __voronoi__.cc, convhulln.cc: Include oct-qhull.h
instead of qhull/qhull_a.h.
* acinclude.m4 (OCTAVE_CHECK_QHULL_VERSION, OCTAVE_CHECK_QHULL_OK):
Look for various qhull header files.
author | John W. Eaton <jwe@octave.org> |
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date | Tue, 13 Dec 2011 16:53:22 -0500 |
parents | 440d7914cf01 |
children | 72c96de7a403 |
rev | line source |
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6823 | 1 /* |
2 | |
11523 | 3 Copyright (C) 2000-2011 Kai Habel |
6823 | 4 |
5 This file is part of Octave. | |
6 | |
7 Octave is free software; you can redistribute it and/or modify it | |
8 under the terms of the GNU General Public License as published by the | |
7016 | 9 Free Software Foundation; either version 3 of the License, or (at your |
10 option) any later version. | |
6823 | 11 |
12 Octave is distributed in the hope that it will be useful, but WITHOUT | |
13 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or | |
14 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License | |
15 for more details. | |
16 | |
17 You should have received a copy of the GNU General Public License | |
7016 | 18 along with Octave; see the file COPYING. If not, see |
19 <http://www.gnu.org/licenses/>. | |
6823 | 20 |
21 */ | |
22 | |
23 /* | |
24 29. July 2000 - Kai Habel: first release | |
25 2002-04-22 Paul Kienzle | |
26 * Use warning(...) function rather than writing to cerr | |
27 2006-05-01 Tom Holroyd | |
28 * add support for consistent winding in all dimensions; output is | |
29 * guaranteed to be simplicial. | |
30 */ | |
31 | |
32 #ifdef HAVE_CONFIG_H | |
33 #include <config.h> | |
34 #endif | |
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35 |
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36 #include <sstream> |
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37 |
6823 | 38 #include "Cell.h" |
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39 #include "defun-dld.h" |
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40 #include "error.h" |
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41 #include "oct-obj.h" |
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42 #include "parse.h" |
6823 | 43 |
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44 #if defined (HAVE_QHULL) |
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45 # include "oct-qhull.h" |
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46 # if defined (NEED_QHULL_VERSION) |
6823 | 47 char qh_version[] = "convhulln.oct 2007-07-24"; |
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48 # endif |
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49 #endif |
6823 | 50 |
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51 DEFUN_DLD (convhulln, args, nargout, |
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52 "-*- texinfo -*-\n\ |
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53 @deftypefn {Loadable Function} {@var{h} =} convhulln (@var{pts})\n\ |
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54 @deftypefnx {Loadable Function} {@var{h} =} convhulln (@var{pts}, @var{options})\n\ |
8788 | 55 @deftypefnx {Loadable Function} {[@var{h}, @var{v}] =} convhulln (@dots{})\n\ |
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56 Compute the convex hull of the set of points @var{pts} which is a matrix\n\ |
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57 of size [n, dim] containing n points in a space of dimension dim.\n\ |
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58 The hull @var{h} is an index vector into the set of points and specifies\n\ |
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59 which points form the enclosing hull.\n\ |
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60 \n\ |
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61 An optional second argument, which must be a string or cell array of strings,\n\ |
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62 contains options passed to the underlying qhull command.\n\ |
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63 See the documentation for the Qhull library for details\n\ |
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64 @url{http://www.qhull.org/html/qh-quick.htm#options}.\n\ |
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65 The default options depend on the dimension of the input:\n\ |
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66 \n\ |
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67 @itemize\n\ |
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68 @item 2D, 3D, 4D: @var{options} = @code{@{\"Qt\"@}}\n\ |
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69 \n\ |
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70 @item 5D and higher: @var{options} = @code{@{\"Qt\", \"Qx\"@}}\n\ |
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71 @end itemize\n\ |
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72 \n\ |
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73 If @var{options} is not present or @code{[]} then the default arguments are\n\ |
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74 used. Otherwise, @var{options} replaces the default argument list.\n\ |
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75 To append user options to the defaults it is necessary to repeat the\n\ |
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76 default arguments in @var{options}. Use a null string to pass no arguments.\n\ |
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77 \n\ |
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78 If the second output @var{v} is requested the volume of the enclosing\n\ |
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79 convex hull is calculated.\n\n\ |
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80 @seealso{convhull, delaunayn, voronoin}\n\ |
6823 | 81 @end deftypefn") |
82 { | |
83 octave_value_list retval; | |
6959 | 84 |
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85 #if defined (HAVE_QHULL) |
6823 | 86 |
6959 | 87 int nargin = args.length (); |
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88 if (nargin < 1 || nargin > 2) |
6823 | 89 { |
90 print_usage (); | |
91 return retval; | |
92 } | |
93 | |
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94 Matrix points (args(0).matrix_value ()); |
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95 const octave_idx_type dim = points.columns (); |
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96 const octave_idx_type num_points = points.rows (); |
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97 |
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98 points = points.transpose (); |
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99 |
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100 std::string options; |
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101 |
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102 if (dim <= 4) |
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103 options = " Qt"; |
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104 else |
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105 options = " Qt Qx"; |
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106 |
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107 if (nargin == 2) |
6823 | 108 { |
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109 if (args(1).is_string ()) |
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110 options = " " + args(1).string_value (); |
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111 else if (args(1).is_empty ()) |
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112 ; // Use default options. |
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113 else if (args(1).is_cellstr ()) |
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114 { |
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115 options = ""; |
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116 |
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117 Array<std::string> tmp = args(1).cellstr_value (); |
6823 | 118 |
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119 for (octave_idx_type i = 0; i < tmp.numel (); i++) |
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120 options += " " + tmp(i); |
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121 } |
6823 | 122 else |
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123 { |
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124 error ("convhulln: OPTIONS must be a string, cell array of strings, or empty"); |
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125 return retval; |
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126 } |
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127 } |
6823 | 128 |
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129 boolT ismalloc = false; |
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130 |
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131 // Replace the 0 pointer with stdout for debugging information. |
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132 FILE *outfile = 0; |
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133 FILE *errfile = stderr; |
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134 |
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135 // qh_new_qhull command and points arguments are not const... |
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136 |
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137 std::string cmd = "qhull" + options; |
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138 |
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139 OCTAVE_LOCAL_BUFFER (char, cmd_str, cmd.length () + 1); |
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140 |
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141 strcpy (cmd_str, cmd.c_str ()); |
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142 |
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143 int exitcode = qh_new_qhull (dim, num_points, points.fortran_vec (), |
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144 ismalloc, cmd_str, outfile, errfile); |
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145 if (! exitcode) |
6823 | 146 { |
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147 bool nonsimp_seen = false; |
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148 |
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149 octave_idx_type nf = qh num_facets; |
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151 Matrix idx (nf, dim + 1); |
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153 facetT *facet; |
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154 |
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155 octave_idx_type i = 0; |
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156 |
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157 FORALLfacets |
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158 { |
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159 octave_idx_type j = 0; |
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160 |
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161 if (! nonsimp_seen && ! facet->simplicial) |
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162 { |
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163 nonsimp_seen = true; |
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165 if (cmd.find ("QJ") != std::string::npos) |
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166 { |
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167 // Should never happen with QJ. |
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168 error ("convhulln: qhull failed: option 'QJ' returned non-simplicial facet"); |
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169 return retval; |
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170 } |
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171 } |
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172 |
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173 if (dim == 3) |
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174 { |
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175 setT *vertices = qh_facet3vertex (facet); |
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176 |
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177 vertexT *vertex, **vertexp; |
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178 |
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179 FOREACHvertex_ (vertices) |
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180 idx(i, j++) = 1 + qh_pointid(vertex->point); |
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181 |
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182 qh_settempfree (&vertices); |
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183 } |
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184 else |
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185 { |
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186 if (facet->toporient ^ qh_ORIENTclock) |
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187 { |
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188 vertexT *vertex, **vertexp; |
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189 |
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190 FOREACHvertex_ (facet->vertices) |
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191 idx(i, j++) = 1 + qh_pointid(vertex->point); |
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192 } |
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193 else |
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194 { |
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195 vertexT *vertex, **vertexp; |
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196 |
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197 FOREACHvertexreverse12_ (facet->vertices) |
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198 idx(i, j++) = 1 + qh_pointid(vertex->point); |
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199 } |
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200 } |
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201 if (j < dim) |
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202 warning ("convhulln: facet %d only has %d vertices", i, j); |
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203 |
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204 i++; |
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205 } |
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206 |
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207 // Remove extra dimension if all facets were simplicial. |
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208 |
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209 if (! nonsimp_seen) |
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210 idx.resize (nf, dim, 0.0); |
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211 |
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212 if (nargout == 2) |
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213 { |
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214 // Calculate volume of convex hull, taken from qhull src/geom2.c. |
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215 |
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216 realT area; |
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217 realT dist; |
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218 |
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219 FORALLfacets |
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220 { |
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221 if (! facet->normal) |
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222 continue; |
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223 |
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224 if (facet->upperdelaunay && qh ATinfinity) |
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225 continue; |
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226 |
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227 facet->f.area = area = qh_facetarea (facet); |
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228 facet->isarea = True; |
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229 |
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230 if (qh DELAUNAY) |
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231 { |
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232 if (facet->upperdelaunay == qh UPPERdelaunay) |
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233 qh totarea += area; |
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234 } |
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235 else |
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236 { |
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237 qh totarea += area; |
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238 qh_distplane (qh interior_point, facet, &dist); |
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239 qh totvol += -dist * area/ qh hull_dim; |
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240 } |
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241 } |
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242 |
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243 retval(1) = octave_value (qh totvol); |
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244 } |
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245 |
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246 retval(0) = idx; |
6823 | 247 } |
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248 else |
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249 error ("convhulln: qhull failed"); |
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251 // Free memory from Qhull |
6959 | 252 qh_freeqhull (! qh_ALL); |
253 | |
6823 | 254 int curlong, totlong; |
255 qh_memfreeshort (&curlong, &totlong); | |
256 | |
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257 if (curlong || totlong) |
6959 | 258 warning ("convhulln: did not free %d bytes of long memory (%d pieces)", |
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259 totlong, curlong); |
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260 |
6823 | 261 #else |
262 error ("convhulln: not available in this version of Octave"); | |
263 #endif | |
6959 | 264 |
6823 | 265 return retval; |
266 } | |
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267 |
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268 /* |
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269 %!testif HAVE_QHULL |
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270 %! cube = [0 0 0;1 0 0;1 1 0;0 1 0;0 0 1;1 0 1;1 1 1;0 1 1]; |
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271 %! [h, v] = convhulln (cube); |
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272 %! assert (size (h), [6 4]); |
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273 %! h = sortrows (sort (h, 2), [1:4]); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
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274 %! assert (h, [1 2 3 4; 1 2 5 6; 1 4 5 8; 2 3 6 7; 3 4 7 8; 5 6 7 8]); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
275 %! assert (v, 1, 10*eps); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
276 |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
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277 %!testif HAVE_QHULL |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
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278 %! cube = [0 0 0;1 0 0;1 1 0;0 1 0;0 0 1;1 0 1;1 1 1;0 1 1]; |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
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279 %! [h, v] = convhulln (cube, "QJ"); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
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280 %! assert (size (h), [12 3]); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
281 %! assert (sortrows (sort (h, 2), [1:3]), [1 2 4; 1 2 5; 1 4 5; 2 3 4; 2 3 6; 2 5 6; 3 4 8; 3 6 7; 3 7 8; 4 5 8; 5 6 8; 6 7 8]); |
8786
dbd428efbf56
Add calculation convex hull volume
Kai Habel <kai.habel@gmx.de>
parents:
7520
diff
changeset
|
282 %! assert (v, 1.0, 1e6*eps); |
13746
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
283 |
10474
b2143d97c002
Neither include qhull/qhull_a.h nor run tests unless we HAVE_QHULL.
David Grundberg <davidg@cs.umu.se>
parents:
10257
diff
changeset
|
284 %!testif HAVE_QHULL |
8786
dbd428efbf56
Add calculation convex hull volume
Kai Habel <kai.habel@gmx.de>
parents:
7520
diff
changeset
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285 %! tetrahedron = [1 1 1;-1 -1 1;-1 1 -1;1 -1 -1]; |
13746
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
286 %! [h, v] = convhulln (tetrahedron); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
287 %! h = sortrows (sort (h, 2), [1 2 3]); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
288 %! assert (h, [1 2 3;1 2 4; 1 3 4; 2 3 4]); |
7ff0bdc3dc4c
Revamp geometry functions dependent on Qhull (Bug #34604, Bug #33346)
Rik <octave@nomad.inbox5.com>
parents:
11586
diff
changeset
|
289 %! assert (v, 8/3, 10*eps); |
8786
dbd428efbf56
Add calculation convex hull volume
Kai Habel <kai.habel@gmx.de>
parents:
7520
diff
changeset
|
290 */ |