Mercurial > hg > octave-nkf
view scripts/ode/odeset.m @ 20796:e5f36a7854a5
Remove fuzzy matching from odeset/odeget.
* levenshtein.cc: Deleted file.
* libinterp/corefcn/module.mk: Remove levenshtein.cc from build system.
* fuzzy_compare.m: Deleted file.
* scripts/ode/module.mk: Remove fuzzy_compare.m from build system
* odeget.m: Reword docstring. Use a persistent cellstr variable to keep track
of all options. Replace fuzzy_compare() calls with combination of strcmpi and
strncmpi. Report errors relative to function odeget rather than OdePkg.
Rewrite and extend BIST tests. Add input validation BIST tests.
* odeset.m: Reword docstring. Use a persistent cellstr variable to keep track
of all options. Replace fuzzy_compare() calls with combination of strcmpi and
strncmpi. Report errors relative to function odeset rather than OdePkg.
Use more meaningful variables names and create intermediate variables with
logical names to help make code readable. Remove interactive input when
multiple property names match and just issue an error. Rewrite BIST tests.
* ode_struct_value_check.m: Remove input checking for private function which
must always be invoked correctly by caller. Use intermediate variables opt and
val to make the code more understandable. Consolidate checks on values into
single if statements. Use 'val == fix (val)' to check for integer.
* __unimplemented__.m: Removed odeset, odeget, ode45 from list.
author | Rik <rik@octave.org> |
---|---|
date | Fri, 09 Oct 2015 12:03:23 -0700 |
parents | 45151de7423f |
children |
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## Copyright (C) 2013, Roberto Porcu' <roberto.porcu@polimi.it> ## Copyright (C) 2006-2012, Thomas Treichl <treichl@users.sourceforge.net> ## ## This file is part of Octave. ## ## Octave is free software; you can redistribute it and/or modify it ## under the terms of the GNU General Public License as published by ## the Free Software Foundation; either version 3 of the License, or (at ## your option) any later version. ## ## Octave is distributed in the hope that it will be useful, but ## WITHOUT ANY WARRANTY; without even the implied warranty of ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU ## General Public License for more details. ## ## You should have received a copy of the GNU General Public License ## along with Octave; see the file COPYING. If not, see ## <http://www.gnu.org/licenses/>. ## -*- texinfo -*- ## @deftypefn {Function File} {} odeset () ## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{}) ## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{oldstruct}, @var{"field1"}, @var{value1}, @var{"field2"}, @var{value2}, @dots{}) ## @deftypefnx {Function File} {@var{odestruct} =} odeset (@var{oldstruct}, @var{newstruct}) ## ## Create or modify an ODE options structure. ## ## When called without an input argument, return a new ODE options structure ## that contains all possible fields initialized to their default values. ## ## If called with string input arguments @var{"field1"}, @var{"field2"}, ## @dots{} identifying valid ODE options then return a new ODE options ## structure with all possible fields initialized @strong{and} set the values ## of the fields @var{"field1"}, @var{"field2"}, @dots{} to the values ## @var{value1}, @var{value2}, @dots{} ## ## If called with an input structure @var{oldstruct} then overwrite the values ## of the options @var{"field1"}, @var{"field2"}, @dots{} with new values ## @var{value1}, @var{value2}, @dots{} and return the modified structure. ## ## When called with two input ODE options structures @var{oldstruct} and ## @var{newstruct} overwrite all values from the structure @var{oldstruct} with ## new values from the structure @var{newstruct}. Empty values in ## @var{newstruct} will not overwrite values in @var{oldstruct}. ## @seealso{odeget} ## @end deftypefn function odestruct = odeset (varargin) ## Special calling syntax to display defaults if (nargin == 0 && nargout == 0) print_options (); return; endif ## Column vector of all possible OdePkg options persistent options = {"AbsTol"; "Algorithm"; "BDF"; "Choice"; "Eta"; "Events"; "Explicit"; "InexactSolver"; "InitialSlope"; "InitialStep"; "Jacobian"; "JConstant"; "JPattern"; "Mass"; "MassConstant"; "MassSingular"; "MaxNewtonIterations"; "MaxOrder"; "MaxStep"; "MStateDependence"; "MvPattern"; "NewtonTol"; "NonNegative"; "NormControl"; "OutputFcn"; "OutputSave"; "OutputSel"; "PolynomialDegree"; "QuadratureOrder"; "Refine"; "RelTol"; "Restart"; "Stats"; "TimeStepNumber"; "TimeStepSize"; "UseJacobian"; "Vectorized"}; ## initialize output odestruct = cell2struct (cell (numel (options), 1), options); if (nargin == 0) return; endif if (isstruct (varargin{1})) oldstruct = varargin{1}; ode_struct_value_check (oldstruct); oldstruct_fldnames = (fieldnames (oldstruct)).'; ## Copy oldstruct values into output odestruct for fldname = oldstruct_fldnames name = lower (fldname{1}); exactmatch = true; match = find (strcmpi (name, options)); if (isempty (match)) match = find (strncmpi (name, options, length (name))); exactmatch = false; endif if (isempty (match)) error ("odeset: invalid property '%s'", fldname{1}); elseif (numel (match) == 1) if (! exactmatch) warning ("odeset:NoExactMatching", "no exact match for '%s'. Assuming '%s'.", name, options{match}); endif odestruct.(options{match}) = oldstruct.(fldname{1}); else error ("odeset: no exact match for '%s'. Possible fields found: %s.", name, strjoin (options(match), ", ")); endif endfor ## At this point, odestruct has been initialized with default values, ## and if oldstruct was present it has overwritten fields in odestruct. if (nargin == 2 && isstruct (varargin{2})) newstruct = varargin{2}; ode_struct_value_check (newstruct); newstruct_fldnames = (fieldnames (newstruct)).'; ## Update the first struct with the values from the second one for fldname = newstruct_fldnames name = lower (fldname{1}); exactmatch = true; match = find (strcmpi (name, options)); if (isempty (match)) match = find (strncmpi (name, options, length (name))); exactmatch = false; endif if (isempty (match)) error ("odeset: invalid property '%s'", fldname{1}); elseif (numel (match) == 1) if (! exactmatch) warning ("odeset:NoExactMatching", "no exact match for '%s'. Assuming '%s'.", name, options{match}); endif odestruct.(options{match}) = newstruct.(fldname{1}); else error ("odeset: no exact match for '%s'. Possible fields found: %s.", name, strjoin (options(match), ", ")); endif endfor ## Done copying newstruct to oldstruct return; endif ## Second argument is not a struct if (mod (nargin, 2) != 1) error ("odeset: FIELD/VALUE arguments must occur in pairs"); endif if (! all (cellfun ("isclass", varargin(2:2:end), "char"))) error ("odeset: All FIELD names must be strings"); endif ## Write new field/value pairs into odestruct for i = 2:2:nargin name = lower (varargin{i}); exactmatch = true; match = find (strcmpi (name, options)); if (isempty (match)) match = find (strncmpi (name, options, length (name))); exactmatch = false; endif if (isempty (match)) error ("odeset: invalid property '%s'", varargin{i}); elseif (numel (match) == 1) if (! exactmatch) warning ("odeset:NoExactMatching", "no exact match for '%s'. Assuming '%s'.", name, options{match}); endif odestruct.(options{match}) = varargin{i+1}; else error ("odeset: no exact match for '%s'. Possible fields found: %s.", name, strjoin (options(match), ", ")); endif endfor ## Check if all changes have resulted in a valid OdePkg struct ode_struct_value_check (odestruct); else ## First input argument was not a struct, must be field/value pairs if (mod (nargin, 2) != 0) error ("odeset: FIELD/VALUE arguments must occur in pairs"); elseif (! all (cellfun ("isclass", varargin(1:2:end), "char"))) error ("odeset: All FIELD names must be strings"); endif for i = 1:2:nargin name = lower (varargin{i}); exactmatch = true; match = find (strcmpi (name, options)); if (isempty (match)) match = find (strncmpi (name, options, length (name))); exactmatch = false; endif if (isempty (match)) error ("odeset: invalid property '%s'", varargin{i}); elseif (numel (match) == 1) if (! exactmatch) warning ("odeset:NoExactMatching", "no exact match for '%s'. Assuming '%s'.", name, options{match}); endif odestruct.(options{match}) = varargin{i+1}; else error ("odeset: no exact match for '%s'. Possible fields found: %s.", name, strjoin (options(match), ", ")); endif endfor ## Check if all changes have resulted in a valid OdePkg struct ode_struct_value_check (odestruct); endif endfunction ## function useful to print all the possible options function print_options () disp ("List of all possible ODE solver options."); disp ("Default values are in square brackets."); disp (""); disp (" AbsTol: scalar or vector, >0, [1e-6]"); disp (" Algorithm: string, {['gmres'], 'pcg', 'bicgstab'}"); disp (" BDF: binary, {'on', ['off']}"); disp (" Choice: switch, {[1], 2}"); disp (" Eta: scalar, >=0, <1, [0.5]"); disp (" Events: function_handle, []"); disp (" Explicit: binary, {'yes', ['no']}"); disp (" InexactSolver: string, {'inexact_newton', 'fsolve', []}"); disp (" InitialSlope: vector, []"); disp (" InitialStep: scalar, >0, []"); disp (" Jacobian: matrix or function_handle, []"); disp (" JConstant: binary, {'on', ['off']}"); disp (" JPattern: sparse matrix, []"); disp (" Mass: matrix or function_handle, []"); disp (" MassConstant: binary, {'on', ['off']}"); disp (" MassSingular: switch, {'yes', ['maybe'], 'no'}"); disp ("MaxNewtonIterations: scalar, integer, >0, [1e3]"); disp (" MaxOrder: switch, {1, 2, 3, 4, [5]}"); disp (" MaxStep: scalar, >0, []"); disp (" MStateDependence: switch, {'none', ['weak'], 'strong'}"); disp (" MvPattern: sparse matrix, []"); disp (" NewtonTol: scalar or vector, >0, []"); disp (" NonNegative: vector of integers, []"); disp (" NormControl: binary, {'on', ['off']}"); disp (" OutputFcn: function_handle, []"); disp (" OutputSave: scalar, integer, >0, []"); disp (" OutputSel: scalar or vector, []"); disp (" PolynomialDegree: scalar, integer, >0, []"); disp (" QuadratureOrder: scalar, integer, >0, []"); disp (" Refine: scalar, integer, >0, []"); disp (" RelTol: scalar, >0, [1e-3]"); disp (" Restart: scalar, integer, >0, [20]"); disp (" Stats: binary, {'on', ['off']}"); disp (" TimeStepNumber: scalar, integer, >0, []"); disp (" TimeStepSize: scalar, >0, []"); disp (" UseJacobian: binary, {'yes', ['no']}"); disp (" Vectorized: binary, {'on', ['off']}"); endfunction %!demo %! # A new OdePkg options structure with default values is created. %! %! odeoptA = odeset (); %!demo %! # A new OdePkg options structure with manually set options %! # for "AbsTol" and "RelTol" is created. %! %! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1); %!demo %! # A new OdePkg options structure is created from odeoptB with %! # a modified value for option "NormControl". %! %! odeoptB = odeset ("AbsTol", 1e-2, "RelTol", 1e-1); %! odeoptC = odeset (odeoptB, "NormControl", "on"); ## All tests that are needed to check if a correct resp. valid option ## has been set are implemented in ode_struct_value_check.m. %!test %! odeoptA = odeset (); %! assert (isstruct (odeoptA)); %! fields = fieldnames (odeoptA); %! assert (numel (fields), 37); %! assert (all (structfun ("isempty", odeoptA))); %!shared odeoptB, odeoptC %!test %! odeoptB = odeset ("ABSTOL", 1e-2, "reltol", 1e-1); %! assert (odeoptB.AbsTol, 1e-2); # Check canonicalization of name %! assert (odeoptB.RelTol, 1e-1); %!test %! odeoptC = odeset (odeoptB, "NormControl", "on"); %! assert (odeoptC.AbsTol, 1e-2); # check values from first struct copied %! assert (odeoptC.NormControl, "on"); # check new values override old ones %!test %! odeoptD = odeset (odeoptB, odeoptC); %! assert (odeoptD, odeoptC);