Mercurial > hg > octave-nkf
view scripts/statistics/tests/mcnemar_test.m @ 9565:fe57b638e48c
adapt octave-bug.cc.in and mkoctfile.cc.in to recent configure changes
author | Benjamin Lindner <lindnerb@users.sourceforge.net> |
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date | Wed, 26 Aug 2009 11:31:26 -0400 |
parents | a1dbe9d80eee |
children | e00de2d5263c |
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## Copyright (C) 1996, 1997, 1998, 2000, 2002, 2005, 2006, 2007 ## Kurt Hornik ## ## This file is part of Octave. ## ## Octave is free software; you can redistribute it and/or modify it ## under the terms of the GNU General Public License as published by ## the Free Software Foundation; either version 3 of the License, or (at ## your option) any later version. ## ## Octave is distributed in the hope that it will be useful, but ## WITHOUT ANY WARRANTY; without even the implied warranty of ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU ## General Public License for more details. ## ## You should have received a copy of the GNU General Public License ## along with Octave; see the file COPYING. If not, see ## <http://www.gnu.org/licenses/>. ## -*- texinfo -*- ## @deftypefn {Function File} {[@var{pval}, @var{chisq}, @var{df}] =} mcnemar_test (@var{x}) ## For a square contingency table @var{x} of data cross-classified on ## the row and column variables, McNemar's test can be used for testing ## the null hypothesis of symmetry of the classification probabilities. ## ## Under the null, @var{chisq} is approximately distributed as chisquare ## with @var{df} degrees of freedom. ## ## The p-value (1 minus the CDF of this distribution at @var{chisq}) is ## returned in @var{pval}. ## ## If no output argument is given, the p-value of the test is displayed. ## @end deftypefn ## Author: KH <Kurt.Hornik@wu-wien.ac.at> ## Description: McNemar's test for symmetry function [pval, chisq, df] = mcnemar_test (x) if (nargin != 1) print_usage (); endif if (! (min (size (x)) > 1) && issquare (x)) error ("mcnemar_test: x must be a square matrix of size > 1"); elseif (! (all (all (x >= 0)) && all (all (x == round (x))))) error ("mcnemar_test: all entries of x must be nonnegative integers"); endif r = rows (x); df = r * (r - 1) / 2; if (r == 2) num = max (abs (x - x') - 1, 0) .^ 2; else num = abs (x - x') .^ 2; endif chisq = sum (sum (triu (num ./ (x + x'), 1))); pval = 1 - chisquare_cdf (chisq, df); if (nargout == 0) printf (" pval: %g\n", pval); endif endfunction