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1 /* |
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2 |
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3 Copyright (C) 1999, 2000, 2002, 2003, 2004, 2005, 2006, 2007 |
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4 John W. Eaton |
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5 |
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6 This file is part of Octave. |
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7 |
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8 Octave is free software; you can redistribute it and/or modify it |
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9 under the terms of the GNU General Public License as published by the |
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10 Free Software Foundation; either version 3 of the License, or (at your |
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11 option) any later version. |
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12 |
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13 Octave is distributed in the hope that it will be useful, but WITHOUT |
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14 ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or |
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15 FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License |
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16 for more details. |
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17 |
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18 You should have received a copy of the GNU General Public License |
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19 along with Octave; see the file COPYING. If not, see |
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20 <http://www.gnu.org/licenses/>. |
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21 |
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22 */ |
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23 |
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24 #ifdef HAVE_CONFIG_H |
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25 #include <config.h> |
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26 #endif |
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27 |
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28 #include <iomanip> |
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3503
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29 #include <iostream> |
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30 #include <sstream> |
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31 #include <vector> |
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32 |
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5360
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33 #include "Array-util.h" |
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34 #include "byte-swap.h" |
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35 #include "lo-utils.h" |
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4153
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36 #include "quit.h" |
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37 |
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38 #include "defun.h" |
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39 #include "error.h" |
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40 #include "ov-cell.h" |
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41 #include "oct-obj.h" |
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3353
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42 #include "unwind-prot.h" |
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3354
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43 #include "utils.h" |
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3928
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44 #include "ov-base-mat.h" |
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45 #include "ov-base-mat.cc" |
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46 #include "ov-re-mat.h" |
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47 #include "ov-scalar.h" |
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5360
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48 #include "pr-output.h" |
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49 #include "ov-scalar.h" |
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50 |
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51 #include "ls-oct-ascii.h" |
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52 #include "ls-oct-binary.h" |
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53 #include "ls-hdf5.h" |
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54 #include "ls-utils.h" |
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55 |
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56 template class octave_base_matrix<Cell>; |
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57 |
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58 DEFINE_OCTAVE_ALLOCATOR (octave_cell); |
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59 |
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4612
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60 DEFINE_OV_TYPEID_FUNCTIONS_AND_DATA (octave_cell, "cell", "cell"); |
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61 |
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62 static void |
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63 gripe_failed_assignment (void) |
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64 { |
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65 error ("assignment to cell array failed"); |
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66 } |
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67 |
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68 octave_value_list |
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69 octave_cell::subsref (const std::string& type, |
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70 const std::list<octave_value_list>& idx, int nargout) |
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71 { |
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72 octave_value_list retval; |
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73 |
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74 switch (type[0]) |
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75 { |
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76 case '(': |
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77 retval(0) = do_index_op (idx.front ()); |
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78 break; |
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79 |
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80 case '{': |
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81 { |
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82 octave_value tmp = do_index_op (idx.front ()); |
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83 |
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84 if (! error_state) |
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85 { |
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86 Cell tcell = tmp.cell_value (); |
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87 |
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88 if (tcell.length () == 1) |
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89 retval(0) = tcell(0,0); |
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90 else |
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91 { |
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92 octave_idx_type n = tcell.numel (); |
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93 |
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94 octave_value_list lst (n, octave_value ()); |
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95 |
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96 for (octave_idx_type i = 0; i < n; i++) |
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97 { |
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98 OCTAVE_QUIT; |
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99 lst(i) = tcell(i); |
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100 } |
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101 |
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102 retval(0) = octave_value (lst, true); |
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103 } |
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104 } |
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105 } |
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106 break; |
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107 |
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108 case '.': |
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109 { |
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110 std::string nm = type_name (); |
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111 error ("%s cannot be indexed with %c", nm.c_str (), type[0]); |
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112 } |
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113 break; |
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114 |
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115 default: |
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116 panic_impossible (); |
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117 } |
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118 |
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119 // FIXME -- perhaps there should be an |
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120 // octave_value_list::next_subsref member function? See also |
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121 // octave_user_function::subsref. |
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122 |
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123 if (idx.size () > 1) |
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124 retval = retval(0).next_subsref (nargout, type, idx); |
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125 |
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126 return retval; |
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127 } |
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128 |
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129 octave_value |
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130 octave_cell::subsasgn (const std::string& type, |
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131 const std::list<octave_value_list>& idx, |
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132 const octave_value& rhs) |
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133 { |
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134 octave_value retval; |
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135 |
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136 int n = type.length (); |
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137 |
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138 octave_value t_rhs = rhs; |
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139 |
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140 if (n > 1) |
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141 { |
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142 switch (type[0]) |
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143 { |
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144 case '(': |
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145 { |
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146 if (is_empty () && type[1] == '.') |
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147 { |
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148 // Allow conversion of empty cell array to some other |
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149 // type in cases like |
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150 // |
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151 // x = []; x(i).f = rhs |
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152 |
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153 octave_value tmp = octave_value::empty_conv (type, rhs); |
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154 |
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155 return tmp.subsasgn (type, idx, rhs); |
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156 } |
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157 else |
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158 { |
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159 octave_value tmp = do_index_op (idx.front (), true); |
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160 |
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161 if (! tmp.is_defined ()) |
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162 tmp = octave_value::empty_conv (type.substr (1), rhs); |
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163 |
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164 if (! error_state) |
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165 { |
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166 std::list<octave_value_list> next_idx (idx); |
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167 |
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168 next_idx.erase (next_idx.begin ()); |
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169 |
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170 tmp.make_unique (); |
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171 |
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172 t_rhs = tmp.subsasgn (type.substr (1), next_idx, rhs); |
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173 } |
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174 } |
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175 } |
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176 break; |
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177 |
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178 case '{': |
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179 { |
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180 octave_value tmp = do_index_op (idx.front (), true); |
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181 |
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182 if (! tmp.is_defined ()) |
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183 tmp = octave_value::empty_conv (type.substr (1), rhs); |
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184 |
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185 if (! error_state) |
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186 { |
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187 const Cell tcell = tmp.cell_value (); |
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188 |
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189 if (! error_state && tcell.length () == 1) |
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190 { |
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191 tmp = tcell(0,0); |
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192 |
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193 std::list<octave_value_list> next_idx (idx); |
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194 |
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195 next_idx.erase (next_idx.begin ()); |
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196 |
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197 tmp.make_unique (); |
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198 |
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199 if (! tmp.is_defined () || tmp.is_zero_by_zero ()) |
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200 tmp = octave_value::empty_conv (type.substr (1), rhs); |
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201 |
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202 if (! error_state) |
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203 t_rhs = tmp.subsasgn (type.substr (1), next_idx, rhs); |
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204 } |
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205 } |
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206 } |
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207 break; |
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208 |
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209 case '.': |
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210 { |
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211 std::string nm = type_name (); |
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212 error ("%s cannot be indexed with %c", nm.c_str (), type[0]); |
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213 } |
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214 break; |
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215 |
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216 default: |
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217 panic_impossible (); |
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218 } |
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219 } |
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220 |
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221 if (! error_state) |
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222 { |
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223 switch (type[0]) |
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224 { |
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225 case '(': |
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226 { |
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227 octave_value_list i = idx.front (); |
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228 |
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229 if (t_rhs.is_cell ()) |
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230 octave_base_matrix<Cell>::assign (i, t_rhs.cell_value ()); |
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231 else |
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232 if (t_rhs.is_empty ()) |
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233 octave_base_matrix<Cell>::assign (i, Cell()); |
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234 else |
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235 octave_base_matrix<Cell>::assign (i, Cell (t_rhs)); |
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236 |
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237 if (! error_state) |
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238 { |
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239 count++; |
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240 retval = octave_value (this); |
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241 } |
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242 else |
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243 gripe_failed_assignment (); |
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3940
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244 } |
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245 break; |
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246 |
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3940
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247 case '{': |
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248 { |
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249 octave_value_list i = idx.front (); |
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3933
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250 |
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251 if (t_rhs.is_cs_list ()) |
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252 { |
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253 Cell tmp_cell = Cell (t_rhs.list_value ()); |
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254 |
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255 // FIXME -- shouldn't care if the dimensions of the |
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256 // RHS don't match the dimensions of the subscripted |
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257 // LHS. |
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258 |
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259 octave_base_matrix<Cell>::assign (i, tmp_cell); |
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260 } |
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261 else |
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262 octave_base_matrix<Cell>::assign (i, Cell (t_rhs)); |
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3933
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263 |
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6833
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264 if (! error_state) |
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265 { |
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266 count++; |
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267 retval = octave_value (this); |
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268 } |
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269 else |
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270 gripe_failed_assignment (); |
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3940
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271 } |
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272 break; |
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3933
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273 |
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3940
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274 case '.': |
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275 { |
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276 std::string nm = type_name (); |
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277 error ("%s cannot be indexed with %c", nm.c_str (), type[0]); |
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278 } |
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279 break; |
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3933
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280 |
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3940
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281 default: |
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282 panic_impossible (); |
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283 } |
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3933
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284 } |
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285 |
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286 return retval; |
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287 } |
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288 |
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289 void |
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290 octave_cell::assign (const octave_value_list& idx, const octave_value& rhs) |
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291 { |
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292 if (rhs.is_cell ()) |
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293 octave_base_matrix<Cell>::assign (idx, rhs.cell_value ()); |
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294 else |
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295 octave_base_matrix<Cell>::assign (idx, Cell (rhs)); |
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296 } |
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297 |
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4791
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298 size_t |
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299 octave_cell::byte_size (void) const |
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300 { |
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301 size_t retval = 0; |
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302 |
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5275
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303 for (octave_idx_type i = 0; i < numel (); i++) |
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4791
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304 retval += matrix(i).byte_size (); |
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305 |
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306 return retval; |
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307 } |
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308 |
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3933
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309 octave_value_list |
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310 octave_cell::list_value (void) const |
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311 { |
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312 octave_value_list retval; |
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313 |
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5275
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314 octave_idx_type nr = rows (); |
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315 octave_idx_type nc = columns (); |
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3933
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316 |
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317 if (nr == 1 && nc > 0) |
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318 { |
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319 retval.resize (nc); |
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320 |
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5275
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321 for (octave_idx_type i = 0; i < nc; i++) |
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322 retval(i) = matrix(0,i); |
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323 } |
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324 else if (nc == 1 && nr > 0) |
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325 { |
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326 retval.resize (nr); |
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327 |
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5275
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328 for (octave_idx_type i = 0; i < nr; i++) |
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3933
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329 retval(i) = matrix(i,0); |
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330 } |
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331 else |
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332 error ("invalid conversion from cell array to list"); |
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333 |
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334 return retval; |
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335 } |
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336 |
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4243
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337 string_vector |
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5715
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338 octave_cell::all_strings (bool pad) const |
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4243
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339 { |
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4358
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340 string_vector retval; |
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341 |
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5275
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342 octave_idx_type nr = rows (); |
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343 octave_idx_type nc = columns (); |
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4243
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344 |
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4358
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345 int n_elts = 0; |
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346 |
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5275
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347 octave_idx_type max_len = 0; |
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4358
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348 |
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5275
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349 for (octave_idx_type j = 0; j < nc; j++) |
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4358
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350 { |
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5275
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351 for (octave_idx_type i = 0; i < nr; i++) |
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4358
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352 { |
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4722
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353 string_vector s = matrix(i,j).all_strings (); |
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4358
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354 |
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4722
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355 if (error_state) |
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356 return retval; |
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4358
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357 |
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4722
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358 n_elts += s.length (); |
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4358
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359 |
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5275
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360 octave_idx_type s_max_len = s.max_length (); |
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4358
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361 |
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4722
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362 if (s_max_len > max_len) |
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363 max_len = s_max_len; |
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4358
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364 } |
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365 } |
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366 |
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367 retval.resize (n_elts); |
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4243
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368 |
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5275
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369 octave_idx_type k = 0; |
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4243
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370 |
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5275
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371 for (octave_idx_type j = 0; j < nc; j++) |
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4243
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372 { |
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5275
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373 for (octave_idx_type i = 0; i < nr; i++) |
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4243
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374 { |
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4358
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375 string_vector s = matrix(i,j).all_strings (); |
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376 |
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377 int n = s.length (); |
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4243
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378 |
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5275
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379 for (octave_idx_type ii = 0; ii < n; ii++) |
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5715
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380 { |
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381 std::string t = s[ii]; |
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382 int t_len = t.length (); |
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383 |
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384 if (pad && max_len > t_len) |
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385 t += std::string (max_len - t_len, ' '); |
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386 |
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387 retval[k++] = t; |
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388 } |
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4243
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389 } |
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390 } |
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391 |
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392 return retval; |
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393 } |
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394 |
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4604
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395 bool |
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396 octave_cell::print_as_scalar (void) const |
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397 { |
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398 return (ndims () > 2 || numel () == 0); |
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399 } |
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400 |
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3933
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401 void |
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402 octave_cell::print (std::ostream& os, bool) const |
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403 { |
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404 print_raw (os); |
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405 } |
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406 |
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407 void |
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408 octave_cell::print_raw (std::ostream& os, bool) const |
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409 { |
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4587
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410 int nd = matrix.ndims (); |
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4513
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411 |
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4587
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412 if (nd == 2) |
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4513
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413 { |
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5275
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414 octave_idx_type nr = rows (); |
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415 octave_idx_type nc = columns (); |
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4513
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416 |
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417 if (nr > 0 && nc > 0) |
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418 { |
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419 indent (os); |
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420 os << "{"; |
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421 newline (os); |
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422 |
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423 increment_indent_level (); |
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424 |
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5275
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425 for (octave_idx_type j = 0; j < nc; j++) |
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4513
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426 { |
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5275
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427 for (octave_idx_type i = 0; i < nr; i++) |
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4513
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428 { |
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429 OCTAVE_QUIT; |
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430 |
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5765
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431 std::ostringstream buf; |
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432 buf << "[" << i+1 << "," << j+1 << "]"; |
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3933
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433 |
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4513
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434 octave_value val = matrix(i,j); |
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435 |
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5765
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436 val.print_with_name (os, buf.str ()); |
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4513
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437 } |
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438 } |
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439 |
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440 decrement_indent_level (); |
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441 |
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442 indent (os); |
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443 os << "}"; |
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444 newline (os); |
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445 } |
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446 else |
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447 { |
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448 os << "{}"; |
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5360
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449 if (Vprint_empty_dimensions) |
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4513
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450 os << "(" << nr << "x" << nc << ")"; |
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451 os << "\n"; |
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452 } |
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453 } |
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454 else |
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3933
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455 { |
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456 indent (os); |
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4513
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457 dim_vector dv = matrix.dims (); |
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4587
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458 os << "{" << dv.str () << " Cell Array}"; |
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3933
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459 newline (os); |
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460 } |
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461 } |
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462 |
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4687
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463 #define CELL_ELT_TAG "<cell-element>" |
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464 |
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465 bool |
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6974
|
466 octave_cell::save_ascii (std::ostream& os) |
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4687
|
467 { |
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468 dim_vector d = dims (); |
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469 if (d.length () > 2) |
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470 { |
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471 os << "# ndims: " << d.length () << "\n"; |
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472 |
|
5275
|
473 for (int i = 0; i < d.length (); i++) |
|
4687
|
474 os << " " << d (i); |
|
|
475 os << "\n"; |
|
|
476 |
|
|
477 Cell tmp = cell_value (); |
|
|
478 |
|
5275
|
479 for (octave_idx_type i = 0; i < d.numel (); i++) |
|
4687
|
480 { |
|
|
481 octave_value o_val = tmp.elem (i); |
|
|
482 |
|
|
483 // Recurse to print sub-value. |
|
6974
|
484 bool b = save_ascii_data (os, o_val, CELL_ELT_TAG, false, 0); |
|
4687
|
485 |
|
|
486 if (! b) |
|
|
487 return os; |
|
|
488 } |
|
|
489 } |
|
|
490 else |
|
|
491 { |
|
|
492 // Keep this case, rather than use generic code above for backward |
|
|
493 // compatiability. Makes load_ascii much more complex!! |
|
|
494 os << "# rows: " << rows () << "\n" |
|
|
495 << "# columns: " << columns () << "\n"; |
|
|
496 |
|
|
497 Cell tmp = cell_value (); |
|
|
498 |
|
5275
|
499 for (octave_idx_type j = 0; j < tmp.cols (); j++) |
|
4687
|
500 { |
|
5275
|
501 for (octave_idx_type i = 0; i < tmp.rows (); i++) |
|
4687
|
502 { |
|
|
503 octave_value o_val = tmp.elem (i, j); |
|
|
504 |
|
|
505 // Recurse to print sub-value. |
|
6974
|
506 bool b = save_ascii_data (os, o_val, CELL_ELT_TAG, false, 0); |
|
4687
|
507 |
|
|
508 if (! b) |
|
|
509 return os; |
|
|
510 } |
|
|
511 |
|
|
512 os << "\n"; |
|
|
513 } |
|
|
514 } |
|
|
515 |
|
|
516 return true; |
|
|
517 } |
|
|
518 |
|
|
519 bool |
|
|
520 octave_cell::load_ascii (std::istream& is) |
|
|
521 { |
|
|
522 bool success = true; |
|
5099
|
523 |
|
|
524 string_vector keywords(2); |
|
4687
|
525 |
|
5099
|
526 keywords[0] = "ndims"; |
|
|
527 keywords[1] = "rows"; |
|
|
528 |
|
|
529 std::string kw; |
|
5275
|
530 octave_idx_type val = 0; |
|
5099
|
531 |
|
|
532 if (extract_keyword (is, keywords, kw, val, true)) |
|
4687
|
533 { |
|
5099
|
534 if (kw == "ndims") |
|
4687
|
535 { |
|
5275
|
536 int mdims = static_cast<int> (val); |
|
4687
|
537 |
|
5099
|
538 if (mdims >= 0) |
|
|
539 { |
|
|
540 dim_vector dv; |
|
|
541 dv.resize (mdims); |
|
|
542 |
|
|
543 for (int i = 0; i < mdims; i++) |
|
|
544 is >> dv(i); |
|
4687
|
545 |
|
5099
|
546 Cell tmp(dv); |
|
4687
|
547 |
|
5275
|
548 for (octave_idx_type i = 0; i < dv.numel (); i++) |
|
5099
|
549 { |
|
|
550 octave_value t2; |
|
|
551 bool dummy; |
|
|
552 |
|
|
553 // recurse to read cell elements |
|
|
554 std::string nm = read_ascii_data (is, std::string (), |
|
5759
|
555 dummy, t2, i); |
|
4687
|
556 |
|
5099
|
557 if (nm == CELL_ELT_TAG) |
|
|
558 { |
|
|
559 if (is) |
|
|
560 tmp.elem (i) = t2; |
|
|
561 } |
|
|
562 else |
|
|
563 { |
|
|
564 error ("load: cell array element had unexpected name"); |
|
|
565 success = false; |
|
|
566 break; |
|
|
567 } |
|
|
568 } |
|
4687
|
569 |
|
5099
|
570 if (is) |
|
|
571 matrix = tmp; |
|
4687
|
572 else |
|
|
573 { |
|
5099
|
574 error ("load: failed to load matrix constant"); |
|
4687
|
575 success = false; |
|
|
576 } |
|
|
577 } |
|
|
578 else |
|
|
579 { |
|
5099
|
580 error ("load: failed to extract number of rows and columns"); |
|
|
581 success = false; |
|
|
582 } |
|
|
583 } |
|
|
584 else if (kw == "rows") |
|
|
585 { |
|
5275
|
586 octave_idx_type nr = val; |
|
|
587 octave_idx_type nc = 0; |
|
5099
|
588 |
|
|
589 if (nr >= 0 && extract_keyword (is, "columns", nc) && nc >= 0) |
|
|
590 { |
|
|
591 if (nr > 0 && nc > 0) |
|
|
592 { |
|
|
593 Cell tmp (nr, nc); |
|
|
594 |
|
5275
|
595 for (octave_idx_type j = 0; j < nc; j++) |
|
5099
|
596 { |
|
5275
|
597 for (octave_idx_type i = 0; i < nr; i++) |
|
5099
|
598 { |
|
|
599 octave_value t2; |
|
|
600 bool dummy; |
|
|
601 |
|
|
602 // recurse to read cell elements |
|
|
603 std::string nm = read_ascii_data (is, std::string (), |
|
5759
|
604 dummy, t2, i); |
|
5099
|
605 |
|
|
606 if (nm == CELL_ELT_TAG) |
|
|
607 { |
|
|
608 if (is) |
|
|
609 tmp.elem (i, j) = t2; |
|
|
610 } |
|
|
611 else |
|
|
612 { |
|
|
613 error ("load: cell array element had unexpected name"); |
|
|
614 success = false; |
|
|
615 goto cell_read_error; |
|
|
616 } |
|
|
617 } |
|
|
618 } |
|
|
619 |
|
|
620 cell_read_error: |
|
|
621 |
|
|
622 if (is) |
|
|
623 matrix = tmp; |
|
|
624 else |
|
|
625 { |
|
|
626 error ("load: failed to load cell element"); |
|
|
627 success = false; |
|
|
628 } |
|
|
629 } |
|
|
630 else if (nr == 0 || nc == 0) |
|
|
631 matrix = Cell (nr, nc); |
|
|
632 else |
|
|
633 panic_impossible (); |
|
|
634 } |
|
|
635 else |
|
|
636 { |
|
|
637 error ("load: failed to extract number of rows and columns for cell array"); |
|
4687
|
638 success = false; |
|
|
639 } |
|
|
640 } |
|
|
641 else |
|
5099
|
642 panic_impossible (); |
|
4687
|
643 } |
|
|
644 else |
|
|
645 { |
|
5099
|
646 error ("load: failed to extract number of rows and columns"); |
|
|
647 success = false; |
|
4687
|
648 } |
|
|
649 |
|
|
650 return success; |
|
|
651 } |
|
|
652 |
|
|
653 bool |
|
|
654 octave_cell::save_binary (std::ostream& os, bool& save_as_floats) |
|
|
655 { |
|
|
656 dim_vector d = dims (); |
|
|
657 if (d.length () < 1) |
|
|
658 return false; |
|
|
659 |
|
|
660 // Use negative value for ndims |
|
5828
|
661 int32_t di = - d.length(); |
|
5760
|
662 os.write (reinterpret_cast<char *> (&di), 4); |
|
5275
|
663 for (int i = 0; i < d.length (); i++) |
|
4687
|
664 { |
|
|
665 di = d(i); |
|
5760
|
666 os.write (reinterpret_cast<char *> (&di), 4); |
|
4687
|
667 } |
|
|
668 |
|
|
669 Cell tmp = cell_value (); |
|
|
670 |
|
5275
|
671 for (octave_idx_type i = 0; i < d.numel (); i++) |
|
4687
|
672 { |
|
|
673 octave_value o_val = tmp.elem (i); |
|
|
674 |
|
|
675 // Recurse to print sub-value. |
|
|
676 bool b = save_binary_data (os, o_val, CELL_ELT_TAG, "", 0, |
|
|
677 save_as_floats); |
|
|
678 |
|
|
679 if (! b) |
|
|
680 return false; |
|
|
681 } |
|
|
682 |
|
|
683 return true; |
|
|
684 } |
|
|
685 |
|
|
686 bool |
|
|
687 octave_cell::load_binary (std::istream& is, bool swap, |
|
|
688 oct_mach_info::float_format fmt) |
|
|
689 { |
|
|
690 bool success = true; |
|
5828
|
691 int32_t mdims; |
|
5760
|
692 if (! is.read (reinterpret_cast<char *> (&mdims), 4)) |
|
4687
|
693 return false; |
|
|
694 if (swap) |
|
4944
|
695 swap_bytes<4> (&mdims); |
|
4687
|
696 if (mdims >= 0) |
|
|
697 return false; |
|
|
698 |
|
|
699 mdims = -mdims; |
|
5828
|
700 int32_t di; |
|
4687
|
701 dim_vector dv; |
|
|
702 dv.resize (mdims); |
|
|
703 |
|
|
704 for (int i = 0; i < mdims; i++) |
|
|
705 { |
|
5760
|
706 if (! is.read (reinterpret_cast<char *> (&di), 4)) |
|
4687
|
707 return false; |
|
|
708 if (swap) |
|
4944
|
709 swap_bytes<4> (&di); |
|
4687
|
710 dv(i) = di; |
|
|
711 } |
|
|
712 |
|
5157
|
713 // Convert an array with a single dimension to be a row vector. |
|
|
714 // Octave should never write files like this, other software |
|
|
715 // might. |
|
|
716 |
|
|
717 if (mdims == 1) |
|
|
718 { |
|
|
719 mdims = 2; |
|
|
720 dv.resize (mdims); |
|
|
721 dv(1) = dv(0); |
|
|
722 dv(0) = 1; |
|
|
723 } |
|
|
724 |
|
5275
|
725 octave_idx_type nel = dv.numel (); |
|
4687
|
726 Cell tmp(dv); |
|
|
727 |
|
5275
|
728 for (octave_idx_type i = 0; i < nel; i++) |
|
4687
|
729 { |
|
|
730 octave_value t2; |
|
|
731 bool dummy; |
|
|
732 std::string doc; |
|
|
733 |
|
|
734 // recurse to read cell elements |
|
|
735 std::string nm = read_binary_data (is, swap, fmt, std::string (), |
|
|
736 dummy, t2, doc); |
|
|
737 |
|
|
738 if (nm == CELL_ELT_TAG) |
|
|
739 { |
|
|
740 if (is) |
|
|
741 tmp.elem (i) = t2; |
|
|
742 } |
|
|
743 else |
|
|
744 { |
|
|
745 error ("load: cell array element had unexpected name"); |
|
|
746 success = false; |
|
|
747 break; |
|
|
748 } |
|
|
749 } |
|
|
750 |
|
|
751 if (is) |
|
|
752 matrix = tmp; |
|
|
753 else |
|
|
754 { |
|
|
755 error ("load: failed to load matrix constant"); |
|
|
756 success = false; |
|
|
757 } |
|
|
758 |
|
|
759 return success; |
|
|
760 } |
|
|
761 |
|
|
762 #if defined (HAVE_HDF5) |
|
4815
|
763 |
|
4687
|
764 bool |
|
|
765 octave_cell::save_hdf5 (hid_t loc_id, const char *name, bool save_as_floats) |
|
|
766 { |
|
4814
|
767 dim_vector dv = dims (); |
|
4837
|
768 int empty = save_hdf5_empty (loc_id, name, dv); |
|
|
769 if (empty) |
|
|
770 return (empty > 0); |
|
|
771 |
|
4815
|
772 hsize_t rank = dv.length (); |
|
4687
|
773 hid_t space_hid = -1, data_hid = -1, size_hid = -1; |
|
|
774 |
|
|
775 data_hid = H5Gcreate (loc_id, name, 0); |
|
4815
|
776 |
|
|
777 if (data_hid < 0) |
|
|
778 return false; |
|
4687
|
779 |
|
4814
|
780 // Have to save cell array shape, since can't have a |
|
|
781 // dataset of groups.... |
|
4815
|
782 |
|
|
783 space_hid = H5Screate_simple (1, &rank, 0); |
|
|
784 |
|
4687
|
785 if (space_hid < 0) |
|
|
786 { |
|
|
787 H5Gclose (data_hid); |
|
|
788 return false; |
|
|
789 } |
|
|
790 |
|
5351
|
791 OCTAVE_LOCAL_BUFFER (octave_idx_type, hdims, rank); |
|
4814
|
792 |
|
|
793 // Octave uses column-major, while HDF5 uses row-major ordering |
|
4933
|
794 for (hsize_t i = 0; i < rank; i++) |
|
4815
|
795 hdims[i] = dv(rank-i-1); |
|
4814
|
796 |
|
5351
|
797 size_hid = H5Dcreate (data_hid, "dims", H5T_NATIVE_IDX, space_hid, |
|
4687
|
798 H5P_DEFAULT); |
|
|
799 if (size_hid < 0) |
|
|
800 { |
|
|
801 H5Sclose (space_hid); |
|
|
802 H5Gclose (data_hid); |
|
|
803 return false; |
|
|
804 } |
|
|
805 |
|
6276
|
806 if (H5Dwrite (size_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
|
|
807 H5P_DEFAULT, hdims) < 0) |
|
4687
|
808 { |
|
|
809 H5Dclose (size_hid); |
|
|
810 H5Sclose (space_hid); |
|
|
811 H5Gclose (data_hid); |
|
|
812 return false; |
|
|
813 } |
|
4815
|
814 |
|
4687
|
815 H5Dclose (size_hid); |
|
|
816 H5Sclose (space_hid); |
|
|
817 |
|
4815
|
818 // Recursively add each element of the cell to this group. |
|
|
819 |
|
4687
|
820 Cell tmp = cell_value (); |
|
5850
|
821 |
|
|
822 octave_idx_type nel = dv.numel (); |
|
|
823 |
|
|
824 for (octave_idx_type i = 0; i < nel; i++) |
|
4687
|
825 { |
|
5765
|
826 std::ostringstream buf; |
|
6276
|
827 int digits = static_cast<int> (floor (log10 (static_cast<double> (nel)) + 1.0)); |
|
5850
|
828 buf << "_" << std::setw (digits) << std::setfill ('0') << i; |
|
5765
|
829 std::string s = buf.str (); |
|
4687
|
830 |
|
5850
|
831 if (! add_hdf5_data (data_hid, tmp.elem (i), s.c_str (), "", false, |
|
|
832 save_as_floats)) |
|
4814
|
833 { |
|
|
834 H5Gclose (data_hid); |
|
|
835 return false; |
|
4687
|
836 } |
|
|
837 } |
|
|
838 |
|
|
839 H5Gclose (data_hid); |
|
4815
|
840 |
|
4687
|
841 return true; |
|
|
842 } |
|
|
843 |
|
|
844 bool |
|
|
845 octave_cell::load_hdf5 (hid_t loc_id, const char *name, |
|
|
846 bool have_h5giterate_bug) |
|
|
847 { |
|
|
848 bool retval = false; |
|
4837
|
849 |
|
|
850 dim_vector dv; |
|
|
851 int empty = load_hdf5_empty (loc_id, name, dv); |
|
|
852 if (empty > 0) |
|
|
853 matrix.resize(dv); |
|
|
854 if (empty) |
|
|
855 return (empty > 0); |
|
|
856 |
|
4687
|
857 hid_t group_id = H5Gopen (loc_id, name); |
|
|
858 |
|
|
859 if (group_id < 0) |
|
|
860 return false; |
|
|
861 |
|
4814
|
862 hid_t data_hid = H5Dopen (group_id, "dims"); |
|
4687
|
863 hid_t space_hid = H5Dget_space (data_hid); |
|
|
864 hsize_t rank = H5Sget_simple_extent_ndims (space_hid); |
|
4814
|
865 if (rank != 1) |
|
4687
|
866 { |
|
4837
|
867 H5Dclose (data_hid); |
|
|
868 H5Gclose (group_id); |
|
4687
|
869 return false; |
|
|
870 } |
|
|
871 |
|
4814
|
872 OCTAVE_LOCAL_BUFFER (hsize_t, hdims, rank); |
|
|
873 OCTAVE_LOCAL_BUFFER (hsize_t, maxdims, rank); |
|
4815
|
874 |
|
4814
|
875 H5Sget_simple_extent_dims (space_hid, hdims, maxdims); |
|
4687
|
876 |
|
4815
|
877 // Octave uses column-major, while HDF5 uses row-major ordering. |
|
|
878 |
|
4814
|
879 dv.resize (hdims[0]); |
|
4815
|
880 |
|
5351
|
881 OCTAVE_LOCAL_BUFFER (octave_idx_type, tmp, hdims[0]); |
|
4814
|
882 |
|
5351
|
883 if (H5Dread (data_hid, H5T_NATIVE_IDX, H5S_ALL, H5S_ALL, |
|
4815
|
884 H5P_DEFAULT, tmp) < 0) |
|
4687
|
885 { |
|
4837
|
886 H5Dclose (data_hid); |
|
|
887 H5Gclose (group_id); |
|
4687
|
888 return false; |
|
|
889 } |
|
4815
|
890 |
|
4687
|
891 H5Dclose (data_hid); |
|
|
892 H5Gclose (group_id); |
|
|
893 |
|
4815
|
894 for (hsize_t i = 0, j = hdims[0] - 1; i < hdims[0]; i++, j--) |
|
4814
|
895 dv(j) = tmp[i]; |
|
|
896 |
|
4687
|
897 hdf5_callback_data dsub; |
|
|
898 |
|
|
899 herr_t retval2 = -1; |
|
4815
|
900 |
|
4814
|
901 Cell m (dv); |
|
4815
|
902 |
|
4687
|
903 int current_item = 0; |
|
4815
|
904 |
|
4687
|
905 if (have_h5giterate_bug) |
|
4815
|
906 current_item = 1; // Skip dims items in group. |
|
4687
|
907 |
|
4696
|
908 #ifdef HAVE_H5GGET_NUM_OBJS |
|
|
909 hsize_t num_obj = 0; |
|
5060
|
910 group_id = H5Gopen (loc_id, name); |
|
|
911 H5Gget_num_objs (group_id, &num_obj); |
|
|
912 H5Gclose (group_id); |
|
4696
|
913 #endif |
|
|
914 |
|
5275
|
915 for (octave_idx_type i = 0; i < dv.numel (); i++) |
|
4687
|
916 { |
|
4696
|
917 |
|
|
918 #ifdef HAVE_H5GGET_NUM_OBJS |
|
4814
|
919 if (current_item >= static_cast<int> (num_obj)) |
|
|
920 retval2 = -1; |
|
|
921 else |
|
4696
|
922 #endif |
|
4814
|
923 retval2 = H5Giterate (loc_id, name, ¤t_item, |
|
|
924 hdf5_read_next_data, &dsub); |
|
|
925 |
|
4687
|
926 if (retval2 <= 0) |
|
|
927 break; |
|
4814
|
928 |
|
|
929 octave_value ov = dsub.tc; |
|
|
930 m.elem (i) = ov; |
|
|
931 |
|
|
932 if (have_h5giterate_bug) |
|
4815
|
933 current_item++; // H5Giterate returned the last index processed. |
|
4814
|
934 |
|
4687
|
935 } |
|
|
936 |
|
|
937 if (retval2 >= 0) |
|
|
938 { |
|
|
939 matrix = m; |
|
|
940 retval = true; |
|
|
941 } |
|
|
942 |
|
|
943 return retval; |
|
|
944 } |
|
4815
|
945 |
|
4687
|
946 #endif |
|
|
947 |
|
3354
|
948 DEFUN (iscell, args, , |
|
3448
|
949 "-*- texinfo -*-\n\ |
|
|
950 @deftypefn {Built-in Function} {} iscell (@var{x})\n\ |
|
|
951 Return true if @var{x} is a cell array object. Otherwise, return\n\ |
|
|
952 false.\n\ |
|
|
953 @end deftypefn") |
|
3354
|
954 { |
|
|
955 octave_value retval; |
|
|
956 |
|
|
957 if (args.length () == 1) |
|
|
958 retval = args(0).is_cell (); |
|
|
959 else |
|
5823
|
960 print_usage (); |
|
3354
|
961 |
|
|
962 return retval; |
|
|
963 } |
|
|
964 |
|
|
965 DEFUN (cell, args, , |
|
3448
|
966 "-*- texinfo -*-\n\ |
|
|
967 @deftypefn {Built-in Function} {} cell (@var{x})\n\ |
|
|
968 @deftypefnx {Built-in Function} {} cell (@var{n}, @var{m})\n\ |
|
|
969 Create a new cell array object. If invoked with a single scalar\n\ |
|
|
970 argument, @code{cell} returns a square cell array with the dimension\n\ |
|
|
971 specified. If you supply two scalar arguments, @code{cell} takes\n\ |
|
|
972 them to be the number of rows and columns. If given a vector with two\n\ |
|
|
973 elements, @code{cell} uses the values of the elements as the number of\n\ |
|
|
974 rows and columns, respectively.\n\ |
|
|
975 @end deftypefn") |
|
3354
|
976 { |
|
|
977 octave_value retval; |
|
|
978 |
|
|
979 int nargin = args.length (); |
|
|
980 |
|
4563
|
981 dim_vector dims; |
|
|
982 |
|
3354
|
983 switch (nargin) |
|
|
984 { |
|
4563
|
985 case 0: |
|
|
986 dims = dim_vector (0, 0); |
|
3354
|
987 break; |
|
|
988 |
|
4563
|
989 case 1: |
|
|
990 get_dimensions (args(0), "cell", dims); |
|
3354
|
991 break; |
|
|
992 |
|
|
993 default: |
|
4563
|
994 { |
|
|
995 dims.resize (nargin); |
|
|
996 |
|
|
997 for (int i = 0; i < nargin; i++) |
|
|
998 { |
|
|
999 dims(i) = args(i).is_empty () ? 0 : args(i).nint_value (); |
|
|
1000 |
|
|
1001 if (error_state) |
|
|
1002 { |
|
|
1003 error ("cell: expecting scalar arguments"); |
|
|
1004 break; |
|
|
1005 } |
|
|
1006 } |
|
|
1007 } |
|
3354
|
1008 break; |
|
|
1009 } |
|
|
1010 |
|
4563
|
1011 if (! error_state) |
|
|
1012 { |
|
|
1013 int ndim = dims.length (); |
|
|
1014 |
|
|
1015 check_dimensions (dims, "cell"); |
|
|
1016 |
|
|
1017 if (! error_state) |
|
|
1018 { |
|
|
1019 switch (ndim) |
|
|
1020 { |
|
|
1021 case 1: |
|
|
1022 retval = Cell (dims(0), dims(0), Matrix ()); |
|
|
1023 break; |
|
|
1024 |
|
|
1025 default: |
|
|
1026 retval = Cell (dims, Matrix ()); |
|
|
1027 break; |
|
|
1028 } |
|
|
1029 } |
|
|
1030 } |
|
|
1031 |
|
3354
|
1032 return retval; |
|
|
1033 } |
|
|
1034 |
|
4610
|
1035 DEFUN (iscellstr, args, , |
|
|
1036 "-*- texinfo -*-\n\ |
|
|
1037 @deftypefn {Built-in Function} {} iscellstr (@var{cell})\n\ |
|
|
1038 Return true if every element of the cell array @var{cell} is a\n\ |
|
|
1039 character string\n\ |
|
|
1040 @end deftypefn") |
|
|
1041 { |
|
4699
|
1042 octave_value retval; |
|
4610
|
1043 |
|
|
1044 if (args.length () == 1) |
|
6116
|
1045 retval = args(0).is_cellstr (); |
|
4610
|
1046 else |
|
5823
|
1047 print_usage (); |
|
4610
|
1048 |
|
|
1049 return retval; |
|
|
1050 } |
|
|
1051 |
|
4817
|
1052 // Note that since Fcellstr calls Fiscellstr, we need to have |
|
|
1053 // Fiscellstr defined first (to provide a declaration) and also we |
|
|
1054 // should keep it in the same file (so we don't have to provide a |
|
|
1055 // declaration) and so we don't have to use feval to call it. |
|
|
1056 |
|
|
1057 DEFUN (cellstr, args, , |
|
|
1058 "-*- texinfo -*-\n\ |
|
|
1059 @deftypefn {Built-in Function} {} cellstr (@var{string})\n\ |
|
|
1060 Create a new cell array object from the elements of the string\n\ |
|
|
1061 array @var{string}.\n\ |
|
|
1062 @end deftypefn") |
|
|
1063 { |
|
|
1064 octave_value retval; |
|
|
1065 |
|
|
1066 if (args.length () == 1) |
|
|
1067 { |
|
|
1068 octave_value_list tmp = Fiscellstr (args, 1); |
|
|
1069 |
|
|
1070 if (tmp(0).is_true ()) |
|
|
1071 retval = args(0); |
|
|
1072 else |
|
|
1073 { |
|
|
1074 string_vector s = args(0).all_strings (); |
|
|
1075 |
|
|
1076 if (! error_state) |
|
5805
|
1077 retval = Cell (s, true); |
|
4817
|
1078 else |
|
|
1079 error ("cellstr: expecting argument to be a 2-d character array"); |
|
|
1080 } |
|
|
1081 } |
|
|
1082 else |
|
5823
|
1083 print_usage (); |
|
4817
|
1084 |
|
|
1085 return retval; |
|
|
1086 } |
|
|
1087 |
|
4762
|
1088 DEFUN (struct2cell, args, , |
|
|
1089 "-*- texinfo -*-\n\ |
|
|
1090 @deftypefn {Built-in Function} {} struct2cell (@var{S})\n\ |
|
|
1091 Create a new cell array from the objects stored in the struct object.\n\ |
|
4764
|
1092 If @var{f} is the number of fields in the structure, the resulting\n\ |
|
|
1093 cell array will have a dimension vector corresponding to\n\ |
|
|
1094 @code{[@var{F} size(@var{S})]}.\n\ |
|
5642
|
1095 @seealso{cell2struct, fieldnames}\n\ |
|
|
1096 @end deftypefn") |
|
4762
|
1097 { |
|
|
1098 octave_value retval; |
|
4764
|
1099 |
|
4762
|
1100 int nargin = args.length (); |
|
4764
|
1101 |
|
4762
|
1102 if (nargin == 1) |
|
|
1103 { |
|
4764
|
1104 Octave_map m = args(0).map_value (); |
|
|
1105 |
|
4762
|
1106 if (! error_state) |
|
|
1107 { |
|
|
1108 dim_vector m_dv = m.dims (); |
|
4764
|
1109 |
|
4762
|
1110 string_vector keys = m.keys (); |
|
4764
|
1111 |
|
5275
|
1112 octave_idx_type fields_numel = keys.length (); |
|
4764
|
1113 |
|
4762
|
1114 // The resulting dim_vector should have dimensions: |
|
|
1115 // [numel(fields) size(struct)] |
|
4764
|
1116 |
|
4762
|
1117 dim_vector result_dv; |
|
4764
|
1118 result_dv.resize (m_dv.length () + 1); // Add 1 for the fields. |
|
|
1119 |
|
|
1120 result_dv(0) = fields_numel; |
|
4762
|
1121 |
|
|
1122 for (int i = 1; i < result_dv.length (); i++) |
|
|
1123 result_dv(i) = m_dv(i-1); |
|
4764
|
1124 |
|
|
1125 // Squeeze to be sure that a (3,1) vector doesn't get turned |
|
|
1126 // into a (3,3,1) vector. |
|
|
1127 |
|
|
1128 result_dv = result_dv.squeeze (); |
|
|
1129 |
|
4762
|
1130 Cell c (result_dv); |
|
4764
|
1131 |
|
|
1132 // Use ra_idx both for counting and for assignments, so |
|
|
1133 // ra_idx(0) will both contain fields_numel for each call to |
|
|
1134 // increment_index and j for each assignment. |
|
|
1135 |
|
5275
|
1136 Array<octave_idx_type> ra_idx (result_dv.length (), 0); |
|
4764
|
1137 ra_idx(0) = fields_numel; |
|
4762
|
1138 |
|
5275
|
1139 for (octave_idx_type i = 0; i < m_dv.numel (); i++) |
|
4762
|
1140 { |
|
5275
|
1141 for (octave_idx_type j = 0; j < fields_numel; j++) |
|
4762
|
1142 { |
|
|
1143 ra_idx(0) = j; |
|
4764
|
1144 |
|
4762
|
1145 Cell c_tmp = m.contents (keys(j)); |
|
4764
|
1146 |
|
|
1147 if (c_tmp.length () > 1) // Is a cell. |
|
4762
|
1148 c(ra_idx) = c_tmp; |
|
4764
|
1149 else if (c_tmp.length () == 1) // Get octave_value. |
|
4762
|
1150 c(ra_idx) = c_tmp(0); |
|
4764
|
1151 else |
|
|
1152 c(ra_idx) = Cell (); |
|
|
1153 |
|
4762
|
1154 ra_idx(0) = fields_numel; |
|
|
1155 } |
|
|
1156 |
|
4764
|
1157 increment_index (ra_idx, result_dv); |
|
4762
|
1158 } |
|
|
1159 |
|
|
1160 retval = c; |
|
|
1161 } |
|
|
1162 else |
|
|
1163 error ("struct2cell: expecting argument to be a cell array"); |
|
|
1164 } |
|
|
1165 else |
|
5823
|
1166 print_usage (); |
|
4764
|
1167 |
|
4762
|
1168 return retval; |
|
|
1169 } |
|
|
1170 |
|
5900
|
1171 mxArray * |
|
|
1172 octave_cell::as_mxArray (void) const |
|
|
1173 { |
|
|
1174 mxArray *retval = new mxArray (dims ()); |
|
|
1175 |
|
|
1176 mxArray **elts = static_cast<mxArray **> (retval->get_data ()); |
|
|
1177 |
|
6686
|
1178 mwSize nel = numel (); |
|
5900
|
1179 |
|
|
1180 const octave_value *p = matrix.data (); |
|
|
1181 |
|
6686
|
1182 for (mwIndex i = 0; i < nel; i++) |
|
5900
|
1183 elts[i] = new mxArray (p[i]); |
|
|
1184 |
|
|
1185 return retval; |
|
|
1186 } |
|
|
1187 |
|
3353
|
1188 /* |
|
|
1189 ;;; Local Variables: *** |
|
|
1190 ;;; mode: C++ *** |
|
|
1191 ;;; End: *** |
|
|
1192 */ |
