annotate scripts/statistics/base/cov.m @ 12856:cad4cba03f19

Deprecate corrcoef, cor and replace with Matlab equivalent corr The value calculated by Octave's corrcoef and cor are the same as the value calculated by the Matlab function corr. Use MathWorks naming convention for this functionality. * corr.m: New file with functionality of corrcoef.m * cov.m, kendall.m, spearman.m, cor_test.m: Adjust scripts to call corr() * statistics/base/module.mk, deprecated/module.mk: Inform Automake about deprecated functions * NEWS: Inform users about deprecation * stats.txi: Add corr() to documentation.
author Rik <octave@nomad.inbox5.com>
date Sat, 16 Jul 2011 20:38:00 -0700
parents 6b2f14af2360
children 72c96de7a403
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11523
fd0a3ac60b0e update copyright notices
John W. Eaton <jwe@octave.org>
parents: 11436
diff changeset
1 ## Copyright (C) 1995-2011 Kurt Hornik
3426
f8dde1807dee [project @ 2000-01-13 08:40:00 by jwe]
jwe
parents: 3367
diff changeset
2 ##
3922
38c61cbf086c [project @ 2002-05-01 06:48:35 by jwe]
jwe
parents: 3458
diff changeset
3 ## This file is part of Octave.
38c61cbf086c [project @ 2002-05-01 06:48:35 by jwe]
jwe
parents: 3458
diff changeset
4 ##
38c61cbf086c [project @ 2002-05-01 06:48:35 by jwe]
jwe
parents: 3458
diff changeset
5 ## Octave is free software; you can redistribute it and/or modify it
38c61cbf086c [project @ 2002-05-01 06:48:35 by jwe]
jwe
parents: 3458
diff changeset
6 ## under the terms of the GNU General Public License as published by
7016
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6754
diff changeset
7 ## the Free Software Foundation; either version 3 of the License, or (at
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6754
diff changeset
8 ## your option) any later version.
3426
f8dde1807dee [project @ 2000-01-13 08:40:00 by jwe]
jwe
parents: 3367
diff changeset
9 ##
3922
38c61cbf086c [project @ 2002-05-01 06:48:35 by jwe]
jwe
parents: 3458
diff changeset
10 ## Octave is distributed in the hope that it will be useful, but
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
11 ## WITHOUT ANY WARRANTY; without even the implied warranty of
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
12 ## MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3426
f8dde1807dee [project @ 2000-01-13 08:40:00 by jwe]
jwe
parents: 3367
diff changeset
13 ## General Public License for more details.
f8dde1807dee [project @ 2000-01-13 08:40:00 by jwe]
jwe
parents: 3367
diff changeset
14 ##
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
15 ## You should have received a copy of the GNU General Public License
7016
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6754
diff changeset
16 ## along with Octave; see the file COPYING. If not, see
93c65f2a5668 [project @ 2007-10-12 06:40:56 by jwe]
jwe
parents: 6754
diff changeset
17 ## <http://www.gnu.org/licenses/>.
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
18
3367
0748b03c3510 [project @ 1999-11-20 14:52:38 by jwe]
jwe
parents: 3200
diff changeset
19 ## -*- texinfo -*-
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
20 ## @deftypefn {Function File} {} cov (@var{x})
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
21 ## @deftypefnx {Function File} {} cov (@var{x}, @var{opt})
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
22 ## @deftypefnx {Function File} {} cov (@var{x}, @var{y})
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
23 ## @deftypefnx {Function File} {} cov (@var{x}, @var{y}, @var{opt})
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
24 ## Compute the covariance matrix.
6754
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
25 ##
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
26 ## If each row of @var{x} and @var{y} is an observation, and each column is
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
27 ## a variable, then the @w{(@var{i}, @var{j})-th} entry of
3367
0748b03c3510 [project @ 1999-11-20 14:52:38 by jwe]
jwe
parents: 3200
diff changeset
28 ## @code{cov (@var{x}, @var{y})} is the covariance between the @var{i}-th
6754
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
29 ## variable in @var{x} and the @var{j}-th variable in @var{y}.
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
30 ## @tex
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
31 ## $$
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
32 ## \sigma_{ij} = {1 \over N-1} \sum_{i=1}^N (x_i - \bar{x})(y_i - \bar{y})
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
33 ## $$
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
34 ## where $\bar{x}$ and $\bar{y}$ are the mean values of $x$ and $y$.
451b346d8c2f [project @ 2007-06-25 17:31:46 by jwe]
jwe
parents: 6046
diff changeset
35 ## @end tex
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
36 ## @ifnottex
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
37 ##
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
38 ## @example
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
39 ## cov (x) = 1/N-1 * SUM_i (x(i) - mean(x)) * (y(i) - mean(y))
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
40 ## @end example
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
41 ##
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
42 ## @end ifnottex
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
43 ##
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
44 ## If called with one argument, compute @code{cov (@var{x}, @var{x})}, the
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
45 ## covariance between the columns of @var{x}.
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
46 ##
11587
c792872f8942 all script files: untabify and strip trailing whitespace
John W. Eaton <jwe@octave.org>
parents: 11523
diff changeset
47 ## The argument @var{opt} determines the type of normalization to use.
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
48 ## Valid values are
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
49 ##
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
50 ## @table @asis
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
51 ## @item 0:
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
52 ## normalize with @math{N-1}, provides the best unbiased estimator of the
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
53 ## covariance [default]
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
54 ##
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
55 ## @item 1:
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
56 ## normalize with @math{N}, this provides the second moment around the mean
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
57 ## @end table
12856
cad4cba03f19 Deprecate corrcoef, cor and replace with Matlab equivalent corr
Rik <octave@nomad.inbox5.com>
parents: 12656
diff changeset
58 ## @seealso{corr}
3367
0748b03c3510 [project @ 1999-11-20 14:52:38 by jwe]
jwe
parents: 3200
diff changeset
59 ## @end deftypefn
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
60
5428
2a16423e4aa0 [project @ 2005-08-23 18:38:27 by jwe]
jwe
parents: 5307
diff changeset
61 ## Author: KH <Kurt.Hornik@wu-wien.ac.at>
3456
434790acb067 [project @ 2000-01-19 06:58:51 by jwe]
jwe
parents: 3426
diff changeset
62 ## Description: Compute covariances
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
63
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
64 function c = cov (x, y = [], opt = 0)
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
65
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
66 if (nargin < 1 || nargin > 3)
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
67 print_usage ();
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
68 endif
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
69
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
70 if ( ! (isnumeric (x) || islogical (x))
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
71 || ! (isnumeric (y) || islogical (y)))
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
72 error ("cov: X and Y must be numeric matrices or vectors");
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
73 endif
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
74
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
75 if (ndims (x) != 2 || ndims (y) != 2)
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
76 error ("cov: X and Y must be 2-D matrices or vectors");
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
77 endif
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
78
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
79 if (nargin == 2 && isscalar (y))
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
80 opt = y;
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
81 endif
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
82
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
83 if (opt != 0 && opt != 1)
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
84 error ("cov: normalization OPT must be 0 or 1");
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
85 endif
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
86
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
87 ## Special case, scalar has zero covariance
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
88 if (isscalar (x))
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
89 if (isa (x, 'single'))
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
90 c = single (0);
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
91 else
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
92 c = 0;
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
93 endif
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
94 return;
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
95 endif
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
96
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
97 if (isrow (x))
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
98 x = x.';
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
99 endif
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
100 n = rows (x);
11587
c792872f8942 all script files: untabify and strip trailing whitespace
John W. Eaton <jwe@octave.org>
parents: 11523
diff changeset
101
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
102 if (nargin == 1 || isscalar (y))
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
103 x = center (x, 1);
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
104 c = conj (x' * x / (n - 1 + opt));
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
105 else
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
106 if (isrow (y))
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
107 y = y.';
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
108 endif
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
109 if (rows (y) != n)
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
110 error ("cov: X and Y must have the same number of observations");
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
111 endif
8977
f464119ec165 further simplify some stats funcs
Jaroslav Hajek <highegg@gmail.com>
parents: 8920
diff changeset
112 x = center (x, 1);
f464119ec165 further simplify some stats funcs
Jaroslav Hajek <highegg@gmail.com>
parents: 8920
diff changeset
113 y = center (y, 1);
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
114 c = conj (x' * y / (n - 1 + opt));
3200
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
115 endif
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
116
781c930425fd [project @ 1998-10-29 05:23:08 by jwe]
jwe
parents:
diff changeset
117 endfunction
7411
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
118
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
119
7411
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
120 %!test
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
121 %! x = rand (10);
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
122 %! cx1 = cov (x);
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
123 %! cx2 = cov (x, x);
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
124 %! assert(size (cx1) == [10, 10] && size (cx2) == [10, 10]);
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
125 %! assert(cx1, cx2, 1e1*eps);
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
126
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
127 %!test
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
128 %! x = [1:3]';
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
129 %! y = [3:-1:1]';
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
130 %! assert (cov (x,y), -1, 5*eps)
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
131 %! assert (cov (x,flipud (y)), 1, 5*eps)
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
132 %! assert (cov ([x, y]), [1 -1; -1 1], 5*eps)
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
133
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
134 %!test
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
135 %! x = single ([1:3]');
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
136 %! y = single ([3:-1:1]');
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
137 %! assert (cov (x,y), single (-1), 5*eps)
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
138 %! assert (cov (x,flipud (y)), single (1), 5*eps)
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
139 %! assert (cov ([x, y]), single ([1 -1; -1 1]), 5*eps)
7411
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
140
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
141 %!test
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
142 %! x = [1:5];
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
143 %! c = cov (x);
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
144 %! assert (isscalar (c));
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
145 %! assert (c, 2.5);
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
146
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
147 %!assert(cov (5), 0);
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
148 %!assert(cov (single(5)), single(0));
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
149
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
150 %!test
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
151 %! x = [1:5];
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
152 %! c = cov (x, 0);
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
153 %! assert(c, 2.5);
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
154 %! c = cov (x, 1);
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
155 %! assert(c, 2);
7411
83a8781b529d [project @ 2008-01-22 21:52:25 by jwe]
jwe
parents: 7017
diff changeset
156
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
157 %% Test input validation
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
158 %!error cov ();
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
159 %!error cov (1, 2, 3, 4);
12656
6b2f14af2360 Overhaul functions in statistics/base directory.
Rik <octave@nomad.inbox5.com>
parents: 11587
diff changeset
160 %!error cov ([1; 2], ["A", "B"]);
11436
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
161 %!error cov (ones (2,2,2));
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
162 %!error cov (ones (2,2), ones (2,2,2));
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
163 %!error cov (1, 3);
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
164 %!error cov (ones (2,2), ones (3,2));
e151e23f73bc Overhaul base statistics functions and documentation of same.
Rik <octave@nomad.inbox5.com>
parents: 9245
diff changeset
165